RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ARHGAP19Q14CB8 494 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 SYTL1Q8IYJ3 562 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 PLD6Q8N2A8 252 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 RAB42Q8N4Z0 105 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 MREGQ8N565 214 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 AGBL5Q8NDL9 886 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SMPDL3AQ92484 453 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 SLC41A2Q96JW4 573 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 TRAPPC9Q96Q05 1148 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CMKLR1Q99788 373 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ACAT2Q9BWD1 397 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 PITPNM3Q9BZ71 974 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 NRSN2Q9GZP1 204 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 POLR1BQ9H9Y6 1135 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 C1GALT1Q9NS00 363 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ABCF3Q9NUQ8 709 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 PISDQ9UG56 409 aa12.32□□□□□ -0.44
SS18-202ENST00000269138 NOVA2Q9UNW9 492 aaKnown RBP12.32□□□□□ -0.44
SS18-202ENST00000269138 AKAP13Q12802 2813 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 TOX3O15405 576 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 TNFSF15O95150 251 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 NUDT17P0C025 328 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 NELFEP18615 380 aaKnown RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 TFEBP19484 476 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 OAS2P29728 719 aaKnown RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 HSD17B2P37059 387 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 GLRBP48167 497 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ATP6V0D1P61421 351 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 RTP5Q14D33 572 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 SF1Q15637 639 aaKnown RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 ZIC1Q15915 447 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 SLC5A12Q1EHB4 618 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 C18orf21Q32NC0 220 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 KIAA1614Q5VZ46 1190 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 AGTRAPQ6RW13 159 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ADAMTSL2Q86TH1 951 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ISCA2Q86U28 154 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 FAM129CQ86XR2 697 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 OR2A1Q8NGT9 310 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 MZB1Q8WU39 189 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 GATA6Q92908 595 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 PMEPA1Q969W9 287 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 KIAA1191Q96A73 305 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 HIST1H2AHQ96KK5 128 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 GPR78Q96P69 363 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 MIPEPQ99797 713 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 HIST1H2AJQ99878 128 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 H2AFJQ9BTM1 129 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ALG9Q9H6U8 611 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 NMRAL1Q9HBL8 299 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 ZNF358Q9NW07 568 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 SIDT1Q9NXL6 827 aaKnown RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 AKAP7Q9P0M2 348 aaPredicted RBP12.31□□□□□ -0.44
SS18-202ENST00000269138 OARD1Q9Y530 152 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 AK5Q9Y6K8 562 aa12.31□□□□□ -0.44
SS18-202ENST00000269138 A0A0J9YY10 115 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 IQANK1A0A1B0GTG1 560 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 A0A1W2PPM1 405 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 ZBTB11O95625 1053 aaPredicted RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 JMJD7P0C870 316 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 EBLN1P0CF75 366 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 FOLR1P15328 257 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 SLC26A3P40879 764 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 MAPK10P53779 464 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 AP1S2P56377 157 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 CYP4F3Q08477 520 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 NAE1Q13564 534 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 TDRPQ86YL5 185 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 GPSM1Q86YR5 675 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
SS18-202ENST00000269138 ZBTB9Q96C00 473 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 FBXL8Q96CD0 374 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 RNF31Q96EP0 1072 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 CTRCQ99895 268 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 APMAPQ9HDC9 416 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 FAM60AQ9NP50 221 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 EURLQ9NYK6 297 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
SS18-202ENST00000269138 PLAAQ9Y263 795 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms