RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ATXN10Q9UBB4 475 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4Q9UBX2 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 ENGP17813 658 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 HNF1BP35680 557 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUOXA1Q1HG43 343 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 ALKAL1Q6UXT8 129 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 ZBTB46Q86UZ6 589 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 MMAAQ8IVH4 418 aaKnown RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 TTLQ8NG68 377 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 WDR26Q9H7D7 661 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 TRBV23OR9-2A0A075B6M9 112 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 JAK1P23458 1154 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 CCR8P51685 355 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 ARSDP51689 593 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 AHSA2Q719I0 299 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 C1orf52Q8N6N3 182 aaKnown RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 NATD1Q8N6N6 113 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 MCFD2Q8NI22 146 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 SLC38A4Q969I6 547 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 CMTM7Q96FZ5 175 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 RIPOR3Q96MK2 946 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 YTHDF1Q9BYJ9 559 aaKnown RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 RNF186Q9NXI6 227 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 FBXW2Q9UKT8 454 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 PDLIM1O00151 329 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 GKP32189 559 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 CREB5Q02930 508 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 C6orf136Q5SQH8 315 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 LY6G5CQ5SRR4 150 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 PRAMEF14Q5SWL7 426 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 PLEKHS1Q5SXH7 462 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 PRAMEF13Q5VWM6 474 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 PDE12Q6L8Q7 609 aaKnown RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 OXR1Q8N573 874 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 SPACA7Q96KW9 195 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.21
PHRF1-201ENST00000264555 PRKD3O94806 890 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.21
PHRF1-201ENST00000264555 KCNC3Q14003 757 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 RABL3Q5HYI8 236 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.33■□□□□ 0.21
PHRF1-201ENST00000264555 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 OTUB2Q96DC9 234 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 TRIB3Q96RU7 358 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.21
PHRF1-201ENST00000264555 SLX4Q8IY92 1834 aa16.33■□□□□ 0.21
PHRF1-201ENST00000264555 SLC31A1O15431 190 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 FSHRP23945 695 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 PLA2G16P53816 162 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 TAB1Q15750 504 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 CLLU1OSQ5K130 101 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 ARNTL2Q8WYA1 636 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 AP3S1Q92572 193 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 IRF7Q92985 503 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 BRINP2Q9C0B6 783 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
PHRF1-201ENST00000264555 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.2
PHRF1-201ENST00000264555 TGFB1P01137 390 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 AGTRAPQ6RW13 159 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 POC5Q8NA72 575 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 WDR48Q8TAF3 677 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF671Q8TAW3 534 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 SLC9A6Q92581 669 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 FZD4Q9ULV1 537 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■■■ 30
PHRF1-201ENST00000264555 GADD45GO95257 159 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 FYNP06241 537 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 DIO3P55073 304 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 LMAN2Q12907 356 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 RAB41Q5JT25 222 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 NEK5Q6P3R8 708 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 ZNF366Q8N895 744 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 BIRC7Q96CA5 298 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 LRCH3Q96II8 777 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 TMEM74Q96NL1 305 aa16.33■□□□□ 0.2
PHRF1-201ENST00000264555 CBFA2T3O75081 653 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 POP7O75817 140 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SNAPC1Q16533 368 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 CNPY1Q3B7I2 92 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 PARGQ86W56 976 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SAMD14Q8IZD0 417 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 C3orf58Q8NDZ4 430 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 NSUN5Q96P11 429 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 PTPN18Q99952 460 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MRPS30Q9NP92 439 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MYH7BA7E2Y1 1941 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 PGGT1BP53609 377 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 SFT2D3Q587I9 215 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 LRRTM4Q86VH4 590 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 NUDT13Q86X67 352 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 ZMIZ2Q8NF64 920 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 TMBIM1Q969X1 311 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 MAFFQ9ULX9 164 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 G3V2L1 256 aa16.32■□□□□ 0.2
PHRF1-201ENST00000264555 GTPBP1O00178 669 aaKnown RBP16.32■□□□□ 0.2
PHRF1-201ENST00000264555 RGS8P57771 180 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms