RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HOXA9P31269 272 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 PIK3CBP42338 1070 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 BNC1Q01954 994 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CREMQ03060 361 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF792Q3KQV3 632 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ZCCHC8Q6NZY4 707 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 FAHD1Q6P587 224 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF517Q6ZMY9 492 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 TRIM46Q7Z4K8 759 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF675Q8TD23 568 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CD200R1Q8TD46 325 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 DNAJB3Q8WWF6 145 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SLC30A2Q9BRI3 323 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 DYRK4Q9NR20 520 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 TAS2R9Q9NYW1 312 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 ASB1Q9Y576 335 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 A0A075B6Q4 140 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 HMX3A6NHT5 357 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 CLCA1A8K7I4 914 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ARVCFO00192 962 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 PCDHGA12O60330 932 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ULK1O75385 1050 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ESR1P03372 595 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ITGA2P17301 1181 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 HNF4AP41235 474 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 RPS5P46782 204 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 CLCNKBP51801 687 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 CSTF3Q12996 717 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 SERINC3Q13530 473 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 EIF4HQ15056 248 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 AAK1Q2M2I8 961 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 DUSP28Q4G0W2 176 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 GLT6D1Q7Z4J2 308 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 SERPINA11Q86U17 422 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ENTHD1Q8IYW4 607 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF683Q8IZ20 524 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 SLC22A15Q8IZD6 547 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 OR4K2Q8NGD2 314 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 C9orf43Q8TAL5 461 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 DNASE1L2Q92874 299 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 HBEGFQ99075 208 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 RHNO1Q9BSD3 238 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 C3orf14Q9HBI5 128 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ZMYM5Q9UJ78 669 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 MRPL42Q9Y6G3 142 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ANKRD36A6QL64 1941 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 A6NL46 340 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 SLITRK5O94991 958 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 C9P02748 559 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 YES1P07947 543 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 PIRTP0C851 137 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 PRKCAP17252 672 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 PAX3P23760 479 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 TBX4P57082 545 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 GPR50Q13585 617 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 MSANTD1Q6ZTZ1 278 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ZSWIM9Q86XI8 627 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 KRT73Q86Y46 540 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 STK40Q8N2I9 435 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 ANGPTL6Q8NI99 470 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 NUDT8Q8WV74 236 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 BARD1Q99728 777 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.48
CHMP2B-201ENST00000263780 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 E9PQ18 207 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PRAMEF11O60813 436 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 NIPSNAP2O75323 286 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 CD72P21854 359 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 PTGER3P43115 390 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 TSPY1Q01534 308 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ABRQ12979 859 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 ARMCX4Q5H9R4 360 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 KIAA1841Q6NSI8 718 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 METTL2BQ6P1Q9 378 aaKnown RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 SCD5Q86SK9 330 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 OR8H2Q8N162 312 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 STX19Q8N4C7 294 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 DNAJC22Q8N4W6 341 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 APH1BQ8WW43 257 aa12.07□□□□□ -0.48
CHMP2B-201ENST00000263780 SLC39A13Q96H72 371 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms