RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MRNIPQ6NTE8 343 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CASC4Q6P4E1 433 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CNSTQ6PJW8 725 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CLEC18BQ6UXF7 455 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 C4orf22Q6V702 233 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 SHISA6Q6ZSJ9 500 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 METTL27Q8N6F8 245 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CLEC18CQ8NCF0 446 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 OR2L8Q8NGY9 312 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 PEX13Q92968 403 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 FKBP10Q96AY3 582 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 MIPEPQ99797 713 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 SOX17Q9H6I2 414 aaPredicted RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 MRM3Q9HC36 420 aaKnown RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CHRAC1Q9NRG0 131 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 FBXL4Q9UKA2 621 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 NXT1Q9UKK6 140 aaKnown RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 CAPN6Q9Y6Q1 641 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 TNRC6AQ8NDV7 1962 aaKnown RBP11.76□□□□□ -0.53
TRAF4-202ENST00000262396 NAV2Q8IVL1 2488 aa11.76□□□□□ -0.53
TRAF4-202ENST00000262396 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 DSCR3O14972 297 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 HCRTR1O43613 425 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 SEMA7AO75326 666 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 VPS26AO75436 327 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 FKBP9O95302 570 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ALBP02768 609 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 CTSBP07858 339 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PAMP19021 973 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 CHRM3P20309 590 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 AOAHP28039 575 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 CMPK1P30085 196 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PEBP1P30086 187 aaKnown RBP11.75□□□□□ -0.53
TRAF4-202ENST00000262396 BDKRB1P46663 353 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 NPY2RP49146 381 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PRAMEF13Q5VWM6 474 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 OVCH1Q7RTY7 1134 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PPP1R32Q7Z5V6 425 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PRUNE1Q86TP1 453 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 VRK3Q8IV63 474 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PARP9Q8IXQ6 854 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 PRSS58Q8IYP2 241 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 LMNTD1Q8N9Z9 388 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 DNAJB14Q8TBM8 379 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 C19orf60Q96EN9 201 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 CABS1Q96KC9 395 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF778Q96MU6 729 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 CRB3Q9BUF7 120 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 UTP6Q9NYH9 597 aaKnown RBP11.75□□□□□ -0.53
TRAF4-202ENST00000262396 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 ZC3H7BQ9UGR2 993 aaKnown RBP11.75□□□□□ -0.53
TRAF4-202ENST00000262396 DRG1Q9Y295 367 aaKnown RBP11.75□□□□□ -0.53
TRAF4-202ENST00000262396 MAU2Q9Y6X3 613 aa11.75□□□□□ -0.53
TRAF4-202ENST00000262396 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 A0A0J9YVX5 310 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 H3BMM5 538 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 NRDCO43847 1150 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 SRPX2O60687 465 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 GPC4O75487 556 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ZSCAN5DPP0CG00 497 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 MMP11P24347 488 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 CXCR2P25025 360 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 MCM3P25205 808 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 PSMA3P25788 255 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 FMO4P31512 558 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 RPA3P35244 121 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 RPL22P35268 128 aaKnown RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 OR1D4P47884 311 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 GABRA4P48169 554 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 CARSP49589 748 aaKnown RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 FOXL2P58012 376 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 CRADDP78560 199 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 CDC16Q13042 620 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 SEMA3AQ14563 771 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 OASLQ15646 514 aaKnown RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 MRPL14Q6P1L8 145 aaKnown RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ZNF534Q76KX8 674 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 MPP5Q8N3R9 675 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 Q8NA96 180 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 LKAAEAR1Q8TD35 194 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 FAM136AQ96C01 138 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 MIEF2Q96C03 454 aa11.74□□□□□ -0.53
TRAF4-202ENST00000262396 WDR77Q9BQA1 342 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-202ENST00000262396 ACAT2Q9BWD1 397 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms