RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 STX7O15400 261 aaKnown RBP15.52■□□□□ 0.08
LMNB1-201ENST00000261366 FFAR2O15552 330 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 IDH3BO43837 385 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 ULK1O75385 1050 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 COL6A1P12109 1028 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 CASP9P55211 416 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 RPP38P78345 283 aaKnown RBP15.52■□□□□ 0.08
LMNB1-201ENST00000261366 ZXDBP98169 803 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 MFSD4BQ5TF39 518 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 OR2T5Q6IEZ7 315 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 ZNF551Q7Z340 670 aaPredicted RBP15.52■□□□□ 0.08
LMNB1-201ENST00000261366 ZNF683Q8IZ20 524 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 OR2T29Q8NH02 315 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 TXNDC15Q96J42 360 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 PPP3R2Q96LZ3 170 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 KCNS3Q9BQ31 491 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 COPS4Q9BT78 406 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 CEP44Q9C0F1 390 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 LRTM1Q9HBL6 345 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 WWOXQ9NZC7 414 aa15.52■□□□□ 0.08
LMNB1-201ENST00000261366 A8MX80 341 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 RGS14O43566 566 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 DYRK3O43781 588 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 KLK8O60259 260 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 DNAJB5O75953 348 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 GLUD1P00367 558 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 TACR1P25103 407 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 ACVR2AP27037 513 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 HOXA9P31269 272 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 S100A5P33763 92 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 IDH2P48735 452 aaKnown RBP15.52■□□□□ 0.07
LMNB1-201ENST00000261366 DGKEP52429 567 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 MRPS15P82914 257 aaKnown RBP15.52■□□□□ 0.07
LMNB1-201ENST00000261366 PCBP1Q15365 356 aaKnown RBP eCLIP15.52■□□□□ 0.071e-18■□□□□ 8.3
LMNB1-201ENST00000261366 FAM171A1Q5VUB5 890 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 USP43Q70EL4 1123 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 GDPD3Q7L5L3 318 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 MMAAQ8IVH4 418 aaKnown RBP15.52■□□□□ 0.07
LMNB1-201ENST00000261366 THEM5Q8N1Q8 247 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 ATAD1Q8NBU5 361 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 RNF38Q9H0F5 515 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 PARVBQ9HBI1 364 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 RNF6Q9Y252 685 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 PCDHGB1Q9Y5G3 927 aa15.52■□□□□ 0.07
LMNB1-201ENST00000261366 LAMA2P24043 3122 aaKnown RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 A0A1W2PQ67 120 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 OR2A25A4D2G3 310 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 LOC730098B7Z3J9 87 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 SH3BGRLO75368 114 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 OTCP00480 354 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 HTR7P34969 479 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 GNPDA1P46926 289 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 TIGD6Q17RP2 521 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 RFX4Q33E94 735 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 SHQ1Q6PI26 577 aaKnown RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 LINGO4Q6UY18 593 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 RNF175Q8N4F7 328 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 CINPQ9BW66 212 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 BOCQ9BWV1 1114 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 EMILIN2Q9BXX0 1053 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 ITPAQ9BY32 194 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 KRT87PA6NCN2 255 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 M0QX08 132 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 TAF4O00268 1085 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 WBP4O75554 376 aaKnown RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 ABCB1P08183 1280 aaPredicted RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 BCKDHAP12694 445 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 CTPS1P17812 591 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 KCNQ1P51787 676 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 TWF1Q12792 350 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 FAM214AQ32MH5 1076 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 PLEKHG6Q3KR16 790 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 PDE12Q6L8Q7 609 aaKnown RBP15.51■□□□□ 0.07
LMNB1-201ENST00000261366 CENPOQ9BU64 300 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 C1QTNF3Q9BXJ4 246 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 CIPCQ9C0C6 399 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 MARCH2Q9P0N8 246 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 UGT2A1Q9Y4X1 527 aa15.51■□□□□ 0.07
LMNB1-201ENST00000261366 CBX4O00257 560 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 ITGAMP11215 1152 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 S100A3P33764 101 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 ARHGEF7Q14155 803 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 PTRHD1Q6GMV3 140 aaKnown RBP15.5■□□□□ 0.07
LMNB1-201ENST00000261366 OR8H2Q8N162 312 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 OR52J3Q8NH60 311 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 ZNF566Q969W8 418 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 SLC39A13Q96H72 371 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 C1orf74Q96LT6 269 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 SH3GL1Q99961 368 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 CLSTN3Q9BQT9 956 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 SP140LQ9H930 580 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 PLXNB2O15031 1838 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 METTL15A6NJ78 407 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 PDZK1P1A8MUH7 402 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 WASH4PA8MWX3 477 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 M0QZ92 97 aa15.5■□□□□ 0.07
LMNB1-201ENST00000261366 TFECO14948 347 aaPredicted RBP15.5■□□□□ 0.07
LMNB1-201ENST00000261366 TLL1O43897 1013 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms