RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TUBB8Q3ZCM7 444 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 RAB42Q8N4Z0 105 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 LRRC8CQ8TDW0 803 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 RAB11FIP5Q9BXF6 653 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 TRIM54Q9BYV2 358 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 ABCG4Q9H172 646 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 MANSC1Q9H8J5 431 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 CD274Q9NZQ7 290 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 ICKQ9UPZ9 632 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 PDE10AQ9Y233 779 aa20.06■□□□□ 0.8
RTCA-201ENST00000260563 APOBEC2Q9Y235 224 aaKnown RBP20.06■□□□□ 0.8
RTCA-201ENST00000260563 DCDC2BA2VCK2 349 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 FAM221BA6H8Z2 402 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 MYO1CO00159 1063 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 IPO13O94829 963 aaKnown RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 S100BP04271 92 aaPredicted RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 HIST1H2AGP0C0S8 130 aaPredicted RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 FGF3P11487 239 aaPredicted RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 AMD1P17707 334 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 HIST1H2ADP20671 130 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 HOXD11P31277 338 aaPredicted RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 SHMT2P34897 504 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 CAPZBP47756 277 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 PRKAA2P54646 552 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 ASPHQ12797 758 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 PFKFB4Q16877 469 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 AMZ1Q400G9 498 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 CCSMST1Q4G0I0 132 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 KLHL35Q6PF15 583 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 FBXO39Q8N4B4 442 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 PTGR2Q8N8N7 351 aaPredicted RBP20.05■□□□□ 0.8
RTCA-201ENST00000260563 PDPRQ8NCN5 879 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 PPP1R14CQ8TAE6 165 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 WDR48Q8TAF3 677 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 RAB3IL1Q8TBN0 382 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 MCOLN3Q8TDD5 553 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 PHF21BQ96EK2 531 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 HIST1H2AHQ96KK5 128 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 HIST1H2AJQ99878 128 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 H2AFJQ9BTM1 129 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 LRRN3Q9H3W5 708 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 SRMSQ9H3Y6 488 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 SPATA7Q9P0W8 599 aa20.05■□□□□ 0.8
RTCA-201ENST00000260563 KRT87PA6NCN2 255 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 B4GAT1O43505 415 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 GUCA1CO95843 209 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 PROS1P07225 676 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 CDK4P11802 303 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 TYRP1P17643 537 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 PKLRP30613 574 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 RAB28P51157 221 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 DNAJB13P59910 316 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 CCL7P80098 99 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 CDKL1Q00532 357 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 E2F1Q01094 437 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 GRB7Q14451 532 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 PCM1Q15154 2024 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 NKAIN2Q5VXU1 208 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 AMIGO1Q86WK6 493 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 OOSP2Q86WS3 158 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 OR4E2Q8NGC2 313 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 OR9A1PQ8NGU1 263 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 ZNF75CPQ92670 426 aaPredicted RBP20.04■□□□□ 0.8
RTCA-201ENST00000260563 RSC1A1Q92681 617 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 XKR8Q9H6D3 395 aa20.04■□□□□ 0.8
RTCA-201ENST00000260563 CNOT1A5YKK6 2376 aaKnown RBP20.04■□□□□ 0.8
RTCA-201ENST00000260563 A0A1W2PQM1 296 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 H2AFYO75367 372 aaKnown RBP20.03■□□□□ 0.8
RTCA-201ENST00000260563 ALDH18A1P54886 795 aaKnown RBP20.03■□□□□ 0.8
RTCA-201ENST00000260563 AP1S2P56377 157 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 SPIDRQ14159 915 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 PUM1Q14671 1186 aaKnown RBP eCLIP20.03■□□□□ 0.8
RTCA-201ENST00000260563 RGS9BPQ6ZS82 235 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 ZCCHC23Q6ZST2 131 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 RAB44Q7Z6P3 723 aaPredicted RBP20.03■□□□□ 0.8
RTCA-201ENST00000260563 SLCO6A1Q86UG4 719 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 TMEM237Q96Q45 408 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 GFM1Q96RP9 751 aaKnown RBP20.03■□□□□ 0.8
RTCA-201ENST00000260563 EGFL8Q99944 293 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 MENTQ9BUN1 341 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 ARL15Q9NXU5 204 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 LNPEPQ9UIQ6 1025 aa20.03■□□□□ 0.8
RTCA-201ENST00000260563 SNRNP200O75643 2136 aaKnown RBP20.03■□□□□ 0.8
RTCA-201ENST00000260563 OR5K3A6NET4 321 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 STX16-NPEPL1H3BU86 382 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 STX16O14662 325 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 KLF11O14901 512 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 ANXA5P08758 320 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 IMPDH1P20839 514 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 CD1CP29017 333 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 LSP1P33241 339 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 PRKAA1Q13131 559 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 CDKL4Q5MAI5 379 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 ATG16L1Q676U5 607 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 OR6Y1Q8NGX8 325 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 IL17FQ96PD4 163 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 PKP4Q99569 1192 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 NRTNQ99748 197 aa20.02■□□□□ 0.8
RTCA-201ENST00000260563 GATA5Q9BWX5 397 aaPredicted RBP20.02■□□□□ 0.8
RTCA-201ENST00000260563 OR6C2Q9NZP2 312 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms