RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 HEMK1Q9Y5R4 338 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 AK9Q5TCS8 1911 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RGPD1P0DJD0 1748 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A087X0M5 115 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A1B0GX30 115 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF705FA8MVS1 300 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SMAD6O43541 496 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZMPSTE24O75844 475 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 IFNA21P01568 189 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 THBS1P07996 1170 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PET100P0DJ07 73 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PTAFRP25105 342 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HSD3B2P26439 372 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 EPHA5P54756 1037 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HNRNPKP61978 463 aaKnown RBP eCLIP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 BST1Q10588 318 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 MTMR1Q13613 665 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM44Q2T9K0 475 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PTCHD3Q3KNS1 767 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM81Q6P7N7 255 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 WDR59Q6PJI9 974 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GDPD3Q7L5L3 318 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LRP10Q7Z4F1 713 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TFAP2DQ7Z6R9 452 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 CPNE9Q8IYJ1 553 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FIBCD1Q8N539 461 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 OR4C5Q8NGB2 326 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RHOXF1Q8NHV9 184 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZDHHC15Q96MV8 337 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 B3GNT5Q9BYG0 378 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 KRCC1Q9NPI7 259 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SMOXQ9NWM0 555 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PAK1IP1Q9NWT1 392 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LGALS13Q9UHV8 139 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 DISP2A7MBM2 1401 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FAM205AQ6ZU69 1335 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A1B0GV72 72 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LCHNA4D1U4 455 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 M0QZK8 103 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 CLIC2O15247 247 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HTRA2O43464 458 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LRIG2O94898 1065 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LY86O95711 162 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 COL6A1P12109 1028 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GALP22466 123 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 MYL7Q01449 175 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SIM2Q14190 667 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GK2Q14410 553 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC36A3Q495N2 470 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PXKQ7Z7A4 578 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RHOT1Q8IXI2 618 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 CENPLQ8N0S6 344 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZFP82Q8N141 532 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDH20Q8N6Y1 951 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RBM4BQ9BQ04 359 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RBM4Q9BWF3 364 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC22A11Q9NSA0 550 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 EMILIN3Q9NT22 766 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GSKIPQ9P0R6 139 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SH3BP4Q9P0V3 963 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 LIPT1Q9Y234 373 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ATRNO75882 1429 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FXYD6-FXYD2A0A087WZ82 144 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FAM237AA0A1B0GTK4 181 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM72A0PK05 275 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 OR5K4A6NMS3 321 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PAPSS1O43252 624 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PI15O43692 258 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 UCHL1P09936 223 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 MBL2P11226 248 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FSHRP23945 695 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GCAP28676 217 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 CTSKP43235 329 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PRKAG1P54619 331 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 DYNLT1P63172 113 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RALGPS1Q5JS13 557 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ANKS1BQ7Z6G8 1248 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FTMTQ8N4E7 242 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ART4Q93070 314 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZSWIM1Q9BR11 485 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 FXYD6Q9H0Q3 95 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 KLQ9UEF7 1012 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RPS6KA6Q9UK32 745 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PSAT1Q9Y617 370 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TAF6LQ9Y6J9 622 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 IRS2Q9Y4H2 1338 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 INHAP05111 366 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RGS8P57771 180 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GPLD1P80108 840 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PFKPQ01813 784 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF33AQ06730 810 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SNTB1Q13884 538 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 IKBKEQ14164 716 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF234Q14588 700 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HKDC1Q2TB90 917 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms