RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 FAM83DQ9H4H8 585 aa21.34■■□□□ 1.01
RNF39-201ENST00000244360 IFT80Q9P2H3 777 aaPredicted RBP21.34■■□□□ 1.01
RNF39-201ENST00000244360 SNX6Q9UNH7 406 aa21.34■■□□□ 1.01
RNF39-201ENST00000244360 AP3M1Q9Y2T2 418 aa21.34■■□□□ 1.01
RNF39-201ENST00000244360 PLXNA2O75051 1894 aa21.34■■□□□ 1.01
RNF39-201ENST00000244360 MTCL1Q9Y4B5 1905 aaKnown RBP21.34■■□□□ 1.01
RNF39-201ENST00000244360 SERTM1A2A2V5 107 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 RFPL2O75678 378 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 RHOP08100 348 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 PCSK2P16519 638 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 JUNBP17275 347 aaPredicted RBP21.33■■□□□ 1.01
RNF39-201ENST00000244360 STT3AP46977 705 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 CYP4F3Q08477 520 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 PTCHD3Q3KNS1 767 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 PYCR3Q53H96 274 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 NEK5Q6P3R8 708 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 PHF12Q96QT6 1004 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 UGT2B28Q9BY64 529 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 PCDHGA11Q9Y5H2 935 aa21.33■■□□□ 1.01
RNF39-201ENST00000244360 hCG_2014768A0A024R1R8 64 aa21.33■■□□□ 1
RNF39-201ENST00000244360 CFAP99D6REC4 459 aa21.33■■□□□ 1
RNF39-201ENST00000244360 CYP2A7P20853 494 aa21.33■■□□□ 1
RNF39-201ENST00000244360 ENTPD1P49961 510 aa21.33■■□□□ 1
RNF39-201ENST00000244360 CLDN8P56748 225 aa21.33■■□□□ 1
RNF39-201ENST00000244360 RUNDC3AQ59EK9 446 aa21.33■■□□□ 1
RNF39-201ENST00000244360 GPR107Q5VW38 600 aa21.33■■□□□ 1
RNF39-201ENST00000244360 DDHD1Q8NEL9 900 aa21.33■■□□□ 1
RNF39-201ENST00000244360 OR2T12Q8NG77 320 aa21.33■■□□□ 1
RNF39-201ENST00000244360 OR52E4Q8NGH9 312 aa21.33■■□□□ 1
RNF39-201ENST00000244360 SELENOMQ8WWX9 145 aa21.33■■□□□ 1
RNF39-201ENST00000244360 SCAMP4Q969E2 229 aa21.33■■□□□ 1
RNF39-201ENST00000244360 SDCCAG3Q96C92 435 aa21.33■■□□□ 1
RNF39-201ENST00000244360 SH3GL1Q99961 368 aa21.33■■□□□ 1
RNF39-201ENST00000244360 P2RY13Q9BPV8 354 aa21.33■■□□□ 1
RNF39-201ENST00000244360 FAM83CQ9BQN1 747 aa21.33■■□□□ 1
RNF39-201ENST00000244360 DCUN1D5Q9BTE7 237 aa21.33■■□□□ 1
RNF39-201ENST00000244360 IKZF5Q9H5V7 419 aa21.33■■□□□ 1
RNF39-201ENST00000244360 MAN2B2Q9Y2E5 1009 aa21.33■■□□□ 1
RNF39-201ENST00000244360 DLGAP4Q9Y2H0 992 aa21.33■■□□□ 1
RNF39-201ENST00000244360 UPK3BL1B0FP48 263 aa21.32■■□□□ 1
RNF39-201ENST00000244360 UPK3BL2E5RIL1 263 aa21.32■■□□□ 1
RNF39-201ENST00000244360 AREL1O15033 823 aa21.32■■□□□ 1
RNF39-201ENST00000244360 ATE1O95260 518 aa21.32■■□□□ 1
RNF39-201ENST00000244360 PRPS2P11908 318 aa21.32■■□□□ 1
RNF39-201ENST00000244360 ACPPP15309 386 aa21.32■■□□□ 1
RNF39-201ENST00000244360 TCF3P15923 654 aa21.32■■□□□ 1
RNF39-201ENST00000244360 RPS14P62263 151 aaKnown RBP21.32■■□□□ 1
RNF39-201ENST00000244360 PLIN5Q00G26 463 aa21.32■■□□□ 1
RNF39-201ENST00000244360 TUBA3CQ13748 450 aa21.32■■□□□ 1
RNF39-201ENST00000244360 CBX2Q14781 532 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 FAM9CQ8IZT9 166 aa21.32■■□□□ 1
RNF39-201ENST00000244360 MYLIPQ8WY64 445 aa21.32■■□□□ 1
RNF39-201ENST00000244360 NRBF2Q96F24 287 aa21.32■■□□□ 1
RNF39-201ENST00000244360 BEGAINQ9BUH8 593 aa21.32■■□□□ 1
RNF39-201ENST00000244360 NTN4Q9HB63 628 aa21.32■■□□□ 1
RNF39-201ENST00000244360 PCDH12Q9NPG4 1184 aa21.32■■□□□ 1
RNF39-201ENST00000244360 RAD18Q9NS91 495 aa21.32■■□□□ 1
RNF39-201ENST00000244360 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 INSL6Q9Y581 213 aa21.32■■□□□ 1
RNF39-201ENST00000244360 HEMK1Q9Y5R4 338 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 LEFTY1O75610 366 aa21.32■■□□□ 1
RNF39-201ENST00000244360 THRBP10828 461 aa21.32■■□□□ 1
RNF39-201ENST00000244360 POLR2EP19388 210 aaKnown RBP21.32■■□□□ 1
RNF39-201ENST00000244360 TMBIM6P55061 237 aa21.32■■□□□ 1
RNF39-201ENST00000244360 RBM48Q5RL73 367 aaKnown RBP21.32■■□□□ 1
RNF39-201ENST00000244360 HENMT1Q5T8I9 393 aaKnown RBP21.32■■□□□ 1
RNF39-201ENST00000244360 BROXQ5VW32 411 aa21.32■■□□□ 1
RNF39-201ENST00000244360 PLPP4Q5VZY2 271 aa21.32■■□□□ 1
RNF39-201ENST00000244360 TRAM1L1Q8N609 369 aa21.32■■□□□ 1
RNF39-201ENST00000244360 SKA2Q8WVK7 121 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 BORCS5Q969J3 196 aa21.32■■□□□ 1
RNF39-201ENST00000244360 OTUB2Q96DC9 234 aa21.32■■□□□ 1
RNF39-201ENST00000244360 MTFMTQ96DP5 389 aaKnown RBP21.32■■□□□ 1
RNF39-201ENST00000244360 CMTM7Q96FZ5 175 aa21.32■■□□□ 1
RNF39-201ENST00000244360 AURKBQ96GD4 344 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 MAGEB10Q96LZ2 347 aaPredicted RBP21.32■■□□□ 1
RNF39-201ENST00000244360 ELOVL6Q9H5J4 265 aa21.32■■□□□ 1
RNF39-201ENST00000244360 TBC1D23Q9NUY8 699 aa21.32■■□□□ 1
RNF39-201ENST00000244360 DNAJC11Q9NVH1 559 aa21.32■■□□□ 1
RNF39-201ENST00000244360 ZBBXA8MT70 800 aa21.31■■□□□ 1
RNF39-201ENST00000244360 UPK1AO00322 258 aa21.31■■□□□ 1
RNF39-201ENST00000244360 PRAMEF4O60810 478 aa21.31■■□□□ 1
RNF39-201ENST00000244360 SLCO2B1O94956 709 aa21.31■■□□□ 1
RNF39-201ENST00000244360 MT-ND1P03886 318 aa21.31■■□□□ 1
RNF39-201ENST00000244360 ALPLP05186 524 aa21.31■■□□□ 1
RNF39-201ENST00000244360 TIMP2P16035 220 aa21.31■■□□□ 1
RNF39-201ENST00000244360 LRIF1Q5T3J3 769 aa21.31■■□□□ 1
RNF39-201ENST00000244360 PRAMEF9Q5VWM5 478 aa21.31■■□□□ 1
RNF39-201ENST00000244360 TBPL2Q6SJ96 375 aa21.31■■□□□ 1
RNF39-201ENST00000244360 Q6ZVL8 140 aa21.31■■□□□ 1
RNF39-201ENST00000244360 OR13F1Q8NGS4 319 aa21.31■■□□□ 1
RNF39-201ENST00000244360 MCOLN3Q8TDD5 553 aa21.31■■□□□ 1
RNF39-201ENST00000244360 TMBIM1Q969X1 311 aa21.31■■□□□ 1
RNF39-201ENST00000244360 FBXL8Q96CD0 374 aa21.31■■□□□ 1
RNF39-201ENST00000244360 TIFAQ96CG3 184 aa21.31■■□□□ 1
RNF39-201ENST00000244360 HHIPQ96QV1 700 aa21.31■■□□□ 1
RNF39-201ENST00000244360 OR52E6Q96RD3 313 aa21.31■■□□□ 1
RNF39-201ENST00000244360 PAIP1Q9H074 479 aaKnown RBP21.31■■□□□ 1
RNF39-201ENST00000244360 TMED5Q9Y3A6 229 aa21.31■■□□□ 1
RNF39-201ENST00000244360 V9GYQ6 96 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms