RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CGREF1Q99674 301 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 KCTD14Q9BQ13 255 aaPredicted RBP17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ARMC1Q9NVT9 282 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 STON1Q9Y6Q2 735 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 E7EQ34 232 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 LAMP2P13473 410 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 WASP42768 502 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 MRPS35P82673 323 aaKnown RBP17.95■□□□□ 0.46
HOXC11-201ENST00000243082 PCDH1Q08174 1060 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 ENPP2Q13822 863 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 XKR6Q5GH73 641 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 SPANXN4Q5MJ08 99 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 ATAT1Q5SQI0 421 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 FAM46CQ5VWP2 391 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 RNF175Q8N4F7 328 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 FBXO15Q8NCQ5 510 aaPredicted RBP17.95■□□□□ 0.46
HOXC11-201ENST00000243082 CLHC1Q8NHS4 586 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 WDR20Q8TBZ3 569 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 FAM110BQ8TC76 370 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 MED8Q96G25 268 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 APIPQ96GX9 242 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 BTBD9Q96Q07 612 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 MUC13Q9H3R2 512 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 CCM2LQ9NUG4 571 aaPredicted RBP17.95■□□□□ 0.46
HOXC11-201ENST00000243082 GPR34Q9UPC5 381 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 USP22Q9UPT9 525 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 XIRP2A4UGR9 3374 aa17.95■□□□□ 0.46
HOXC11-201ENST00000243082 C17orf113A0A1B0GUU1 675 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 POP7O75817 140 aaKnown RBP17.94■□□□□ 0.46
HOXC11-201ENST00000243082 APODP05090 189 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 IL6P05231 212 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 PGRP06401 933 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 CLDN8P56748 225 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 RPS14P62263 151 aaKnown RBP17.94■□□□□ 0.46
HOXC11-201ENST00000243082 PLIN5Q00G26 463 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 DOC2AQ14183 400 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 SELPLGQ14242 412 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 FXNQ16595 210 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 AADATQ8N5Z0 425 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 GOLM1Q8NBJ4 401 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF514Q96K75 400 aaPredicted RBP17.94■□□□□ 0.46
HOXC11-201ENST00000243082 PCYT1BQ9Y5K3 369 aaPredicted RBP17.94■□□□□ 0.46
HOXC11-201ENST00000243082 MYO9BQ13459 2157 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 MID1O15344 667 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 VEGFDO43915 354 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 PRPS2P11908 318 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 AMD1P17707 334 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 HTR1EP28566 365 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 TAS2R38P59533 333 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 GTF2H3Q13889 308 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 ITPRIPL2Q3MIP1 535 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 HMBOX1Q6NT76 420 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 C11orf96Q7Z7L8 435 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 COX14Q96I36 57 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 HIC2Q96JB3 615 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 EFHD1Q9BUP0 239 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 SEMA6AQ9H2E6 1030 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 VAPAQ9P0L0 249 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 TMED5Q9Y3A6 229 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 SNX13Q9Y5W8 968 aa17.94■□□□□ 0.46
HOXC11-201ENST00000243082 CLGNO14967 610 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 RNASEH1O60930 286 aaKnown RBP17.93■□□□□ 0.46
HOXC11-201ENST00000243082 KCNH1O95259 989 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 MTHFD1P11586 935 aaKnown RBP17.93■□□□□ 0.46
HOXC11-201ENST00000243082 TACR1P25103 407 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 MTPNP58546 118 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 MAPKAPK3Q16644 382 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 C2orf27AQ580R0 203 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 AGBL4Q5VU57 503 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CRTC3Q6UUV7 619 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 RALGPS2Q86X27 583 aaPredicted RBP17.93■□□□□ 0.46
HOXC11-201ENST00000243082 OR2L2Q8NH16 312 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF480Q8WV37 535 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 RSPH9Q9H1X1 276 aaPredicted RBP17.93■□□□□ 0.46
HOXC11-201ENST00000243082 S1PR5Q9H228 398 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CLEC1BQ9P126 229 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 TMEM98Q9Y2Y6 226 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 UNC80Q8N2C7 3258 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 TCRBV5S2A0A599 114 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 DHRS12A0PJE2 317 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 MAGEA13PA6NCF6 341 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 IGLON5A6NGN9 336 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 DFNA5O60443 496 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 TIPRLO75663 272 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 NCK1P16333 377 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 SDC1P18827 310 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 SOX9P48436 509 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 PHC1P78364 1004 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 FOLH1Q04609 750 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 ZNF33BQ06732 778 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CST6Q15828 149 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 GRHL2Q6ISB3 625 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 PNCKQ6P2M8 343 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 TMEM154Q6P9G4 183 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 ADAMTSL4Q6UY14 1074 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CACUL1Q86Y37 369 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 CHPFQ8IZ52 775 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 ADGRG5Q8IZF4 528 aa17.93■□□□□ 0.46
HOXC11-201ENST00000243082 OR8J3Q8NGG0 315 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms