RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PROSER1Q86XN7 944 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 JPH3Q8WXH2 748 aaPredicted RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 CLP1Q92989 425 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 ZUFSPQ96AP4 578 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 TMCO6Q96DC7 493 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SLC45A3Q96JT2 553 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 LHPPQ9H008 270 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 RIBC2Q9H4K1 309 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 WDR6Q9NNW5 1121 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 PEX16Q9Y5Y5 336 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 COLEC10Q9Y6Z7 277 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 A6NL46 340 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 UBXN8O00124 270 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 ERAL1O75616 437 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 MT-ND1P03886 318 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 RB1P06400 928 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 GNAO1P09471 354 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 HOXB2P14652 356 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 ELK4P28324 431 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 RING1Q06587 406 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 ITPRIPL2Q3MIP1 535 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 EOGTQ5NDL2 527 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 PIWIL3Q7Z3Z3 882 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 ADHFE1Q8IWW8 467 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 ZNF366Q8N895 744 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 PIK3R3Q92569 461 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 MTERF3Q96E29 417 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SLA2Q9H6Q3 261 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 LIMD1Q9UGP4 676 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 INVSQ9Y283 1065 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 FAM72CH0Y354 149 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 CNTN5O94779 1100 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 PTTG1O95997 202 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 CD247P20963 164 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 GSTM2P28161 218 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 BMPR1AP36894 532 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SCAPQ12770 1279 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 SERINC3Q13530 473 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 RFX4Q33E94 735 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 PDZK1Q5T2W1 519 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 FAM72AQ5TYM5 149 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 FAM72DQ6L9T8 149 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 FAM72BQ86X60 149 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 TMEM130Q8N3G9 435 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 GTPBP2Q9BX10 602 aaKnown RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 SLC2A11Q9BYW1 496 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 OXSMQ9NWU1 459 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 PAQR5Q9NXK6 330 aaPredicted RBP10.75□□□□□ -0.69
COPA-201ENST00000241704 ARL5AQ9Y689 179 aa10.75□□□□□ -0.69
COPA-201ENST00000241704 A0A0J9YYE9 177 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 C12orf71A8MTZ7 269 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 TMCC2O75069 709 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 IFI30P13284 250 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 POU1F1P28069 291 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 DAG1Q14118 895 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 QPRTQ15274 297 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CCDC142Q17RM4 750 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CAPN13Q6MZZ7 669 aaPredicted RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 CCBE1Q6UXH8 406 aaPredicted RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 TRIM69Q86WT6 500 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CFAP206Q8IYR0 622 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 SPPL2AQ8TCT8 520 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ZFP90Q8TF47 636 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 SFXN1Q9H9B4 322 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ING3Q9NXR8 418 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 LAMB1P07942 1786 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 DOCK2Q92608 1830 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 EFCAB10A6NFE3 127 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 M0QZQ0 153 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CPNE3O75131 537 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 STK16O75716 305 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ANGPTL1O95841 491 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 FADS2O95864 444 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 SIRPB2Q5JXA9 342 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 TMEM236Q5W0B7 351 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 GPR156Q8NFN8 814 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 OR13C4Q8NGS5 318 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CDKN2AIPNLQ96HQ2 116 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 MUS81Q96NY9 551 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CYP2S1Q96SQ9 504 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 BTBD1Q9H0C5 482 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CLEC4MQ9H2X3 399 aaPredicted RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 TRIT1Q9H3H1 467 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 SAGE1Q9NXZ1 904 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 NUDT4Q9NZJ9 180 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 CORINQ9Y5Q5 1042 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 KNL1Q8NG31 2342 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 EFCAB9A8MZ26 197 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 PLOD2O00469 737 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 HSMCR30P0CW71 290 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 MATN1P21941 496 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 LEPRP48357 1165 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 RPS7P62081 194 aaKnown RBP10.74□□□□□ -0.69
COPA-201ENST00000241704 LCP2Q13094 533 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ZNF460Q14592 562 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 ZBTB6Q15916 424 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 EML3Q32P44 896 aa10.74□□□□□ -0.69
COPA-201ENST00000241704 UAP1L1Q3KQV9 507 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms