RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 DERL2Q9GZP9 239 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SUDS3Q9H7L9 328 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF696Q9H7X3 374 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 PFDN4Q9NQP4 134 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TRMT13Q9NUP7 481 aaKnown RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 NLE1Q9NVX2 485 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ADA2Q9NZK5 511 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 GABRQQ9UN88 632 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 NDUFAF1Q9Y375 327 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 MTF2Q9Y483 593 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 COMMD3-BMI1R4GMX3 469 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 CHD5Q8TDI0 1954 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 MTMR11A4FU01 709 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CCDC154A6NI56 674 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SYCE1LA8MT33 242 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 E7ENX8 843 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 STX16-NPEPL1H3BU86 382 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TXNDC9O14530 226 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 UBFD1O14562 309 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 STX16O14662 325 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 AZIN1O14977 448 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PFDN6O15212 129 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SLC16A6O15403 523 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SGTAO43765 313 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TBC1D4O60343 1298 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CDK14O94921 469 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TNFAIP8O95379 198 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 VSIG10L2P0DP72 767 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GPX3P22352 226 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 RPL5P46777 297 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF140P52738 457 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PLK1P53350 603 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ACLYP53396 1101 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SLURP1P55000 103 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CDH4P55283 916 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 NFYCQ13952 458 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PABPC1LQ4VXU2 614 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ATAT1Q5SQI0 421 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 LILRA6Q6PI73 481 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CYHR1Q6ZMK1 362 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CHCHD4Q8N4Q1 142 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PTGR2Q8N8N7 351 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ATAD1Q8NBU5 361 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 STAG3L4Q8TBR4 150 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ZUFSPQ96AP4 578 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CDKN2AIPNLQ96HQ2 116 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 DNAJC1Q96KC8 554 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 MARK4Q96L34 752 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 KLHL32Q96NJ5 620 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CCT7Q99832 543 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PKP2Q99959 881 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SH3GL3Q99963 347 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 DDX50Q9BQ39 737 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GPATCH1Q9BRR8 931 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 NUSAP1Q9BXS6 441 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TRIM15Q9C019 465 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 UNKQ9C0B0 810 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 MUC13Q9H3R2 512 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 COPS7BQ9H9Q2 264 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 BCO1Q9HAY6 547 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 VCX3AQ9NNX9 186 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TAS2R13Q9NYV9 303 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ABCD2Q9UBJ2 740 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PRG3Q9Y2Y8 225 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 AP4S1Q9Y587 144 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 AP4B1Q9Y6B7 739 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 COMMD10Q9Y6G5 202 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TYW5A2RUC4 315 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PMS2P1A4D2B8 440 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 AQP12BA6NM10 295 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ENO4A6NNW6 628 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 VSTM5A8MXK1 200 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 HTRA2O43464 458 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 KLK8O60259 260 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ACSL4O60488 711 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TLR5O60602 858 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PYGLP06737 847 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SMIM18P0DKX4 95 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 HSD17B1P14061 328 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 LBPP18428 481 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 HOXD9P28356 352 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 ACVRL1P37023 503 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SLC11A2P49281 568 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TIAL1Q01085 375 aaKnown RBP eCLIP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 GNA12Q03113 381 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PRKCZQ05513 592 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 BNIP2Q12982 314 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 LCP2Q13094 533 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 DYNC1I2Q13409 638 aaKnown RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 TAF1AQ15573 450 aaPredicted RBP7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PPP1R3AQ16821 1122 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PGS1Q32NB8 556 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 FAM171A1Q5VUB5 890 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 NADSYN1Q6IA69 706 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 CHST9Q7L1S5 443 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 SPATA19Q7Z5L4 167 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 PIM3Q86V86 326 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 AQP12AQ8IXF9 295 aa7.73□□□□□ -1.17
CXCR4-201ENST00000241393 NKAPQ8N5F7 415 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms