RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 F9P00740 461 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 GOT1P17174 413 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 PPIBP23284 216 aaKnown RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RAPSNQ13702 412 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 KLHL22Q53GT1 634 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 HSDL2Q6YN16 418 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 SYT12Q8IV01 421 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 MZB1Q8WU39 189 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ZFP3Q96NJ6 502 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TREX2Q9BQ50 279 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 FUZQ9BT04 418 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 C1orf109Q9NX04 203 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 STUB1Q9UNE7 303 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 MAGED1Q9Y5V3 778 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 C2orf81A6NN90 581 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 CLCA1A8K7I4 914 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 JUNP05412 331 aaKnown RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 H2AFB2P0C5Z0 115 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 BTLAQ7Z6A9 289 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ACOT1Q86TX2 421 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 OR6F1Q8NGZ6 308 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TRIB2Q92519 343 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TEFMQ96QE5 360 aaKnown RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 MOCS1Q9NZB8 636 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TSTD3H0UI37 97 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 HOXD10P28358 340 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 VMACQ2NL98 169 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 CRTC1Q6UUV9 634 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RNF111Q6ZNA4 994 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 IL17RDQ8NFM7 739 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 CMASQ8NFW8 434 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 GPR151Q8TDV0 419 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ZDHHC12Q96GR4 267 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 GPR63Q9BZJ6 419 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 TBC1D17Q9HA65 648 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 A0A0X1KG70 313 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 GRID2O43424 1007 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 KCNJ13O60928 360 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 ULK1O75385 1050 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 COL6A1P12109 1028 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 TEKQ02763 1124 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 FAM182AQ5T1J6 154 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 ZCCHC12Q6PEW1 402 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 OR2T35Q8NGX2 323 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 DDX1Q92499 740 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 TMEM203Q969S6 136 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 TMEM80Q96HE8 168 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 BBS4Q96RK4 519 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 MTG2Q9H4K7 406 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 ITGA10O75578 1167 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 CREG1O75629 220 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 CHRM5P08912 532 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 SSTR2P30874 369 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 CXorf57Q6NSI4 855 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 PAMR1Q6UXH9 720 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 OR10G2Q8NGC3 310 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 SYT11Q9BT88 431 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 INTS7Q9NVH2 962 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 GFOD1Q9NXC2 390 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 F8W036 122 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 DDX39BQ13838 428 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 DENND6BQ8NEG7 585 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 BTBD2Q9BX70 525 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 RCOR3Q9P2K3 495 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 GMPR2Q9P2T1 348 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 PSAT1Q9Y617 370 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 NEMP2A6NFY4 417 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 FABP7O15540 132 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 ADAM12O43184 909 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 KCNK2O95069 426 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 IL1R2P27930 398 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 RPP38P78345 283 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 PTGR1Q14914 329 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 NTRK2Q16620 822 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 MSANTD2Q6P1R3 559 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 C7orf57Q8NEG2 295 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 OR52J3Q8NH60 311 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 MOSPD2Q8NHP6 518 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 RPL3LQ92901 407 aaKnown RBP12.59□□□□□ -0.39
VAMP4-201ENST00000236192 COQ8BQ96D53 544 aa12.59□□□□□ -0.39
VAMP4-201ENST00000236192 GPR22Q99680 433 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms