RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 OR52B2Q96RD2 323 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MAGEH1Q9H213 219 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 NUAK1O60285 661 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PCDHGA12O60330 932 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ZNF14P17017 642 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 CPN2P22792 545 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 DCKP27707 260 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HSD17B2P37059 387 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PAQR7Q86WK9 346 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CMASQ8NFW8 434 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 KCNIP3Q9Y2W7 256 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ACADMP11310 421 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HCAR3P49019 387 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ZNF630Q2M218 657 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 SPIN4Q56A73 249 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 FAM46DQ8NEK8 389 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 GPR22Q99680 433 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 EXOSC1Q9Y3B2 195 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 PRRC2BQ5JSZ5 2229 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 C12orf71A8MTZ7 269 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 C1QTNF3-AMACRE9PGA6 284 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PRKYO43930 277 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 RCBTB2O95199 551 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PIRTP0C851 137 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MAXP61244 160 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 DUOXA1Q1HG43 343 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SLC25A25Q6KCM7 469 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TATDN1Q6P1N9 297 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 RAVER1Q8IY67 606 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 NTAN1Q96AB6 310 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ARID1BQ8NFD5 2236 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 OR1I1O60431 355 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 AMHP03971 560 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MAP2K3P46734 347 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CEBPGP53567 150 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 FCGRTP55899 365 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CHIT1Q13231 466 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PNCKQ6P2M8 343 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PIAS4Q8N2W9 510 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 CLIP4Q8N3C7 705 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HASPINQ8TF76 798 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SPATA9Q9BWV2 254 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 OXCT2Q9BYC2 517 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 MRM3Q9HC36 420 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 TAS2R3Q9NYW6 316 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 A0A1B0GVI7 797 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 A0A1B0GVM2 712 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 DISC1C4P0D8 188 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 DLX3O60479 287 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CHRNA5P30532 468 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HSPA12BQ96MM6 686 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TSNAXQ99598 290 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 C10orf71Q711Q0 1435 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HK1P19367 917 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 NAE1Q13564 534 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ZC3HC1Q86WB0 502 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 SLC44A3Q8N4M1 653 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 OSTF1Q92882 214 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 NXPE2Q96DL1 559 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 S100A16Q96FQ6 103 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 FBXL20Q96IG2 436 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SLC39A3Q9BRY0 314 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TMEM168Q9H0V1 697 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 FAM83DQ9H4H8 585 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MYNNQ9NPC7 610 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 FAM120CQ9NX05 1096 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 FUOMA2VDF0 154 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 NT5C1B-RDH14C9J2C7 533 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CFL1P23528 166 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 SEC23BQ15437 767 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PCDH19Q8TAB3 1148 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 UCK2Q9BZX2 261 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TMEM45AQ9NWC5 275 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 SRRDQ9UH36 339 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GOT2P00505 430 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 IL3P08700 152 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 FSHRP23945 695 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ACVR2AP27037 513 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TNFSF9P41273 254 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ABCA11PQ4W5N1 156 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 IRAK1BP1Q5VVH5 260 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 LRRC66Q68CR7 880 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 OR2L3Q8NG85 312 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 OR5J2Q8NH18 312 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 MIPEPQ99797 713 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 RNF181Q9P0P0 153 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ASF1AQ9Y294 204 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 RAI2Q9Y5P3 530 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CACNA1CQ13936 2221 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GDF10P55107 478 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 DSC3Q14574 896 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ANKRD46Q86W74 232 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TTLQ8NG68 377 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 NEK7Q8TDX7 302 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms