RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DGUOKQ16854 277 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 ZIK1Q3SY52 487 aaPredicted RBP20.07■□□□□ 0.8
SNX3-201ENST00000230085 SYT6Q5T7P8 510 aaPredicted RBP20.07■□□□□ 0.8
SNX3-201ENST00000230085 SLC2A7Q6PXP3 512 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 PAQR3Q6TCH7 311 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 AFTPHQ6ULP2 937 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 CYP2U1Q7Z449 544 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 SPNS2Q8IVW8 549 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 PGBD5Q8N414 524 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 FAR1Q8WVX9 515 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 ELSPBP1Q96BH3 223 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 DACH2Q96NX9 599 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 HGH1Q9BTY7 390 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 POLR1EQ9GZS1 481 aaKnown RBP20.07■□□□□ 0.8
SNX3-201ENST00000230085 SP110Q9HB58 689 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 PAK1IP1Q9NWT1 392 aaPredicted RBP20.07■□□□□ 0.8
SNX3-201ENST00000230085 MPP6Q9NZW5 540 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 CFAP97Q9P2B7 532 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 USP22Q9UPT9 525 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 TIMM22Q9Y584 194 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 KCTD3Q9Y597 815 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 LOC100130705A0A1B0GUX0 176 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 ISPDA4D126 451 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 J3KR12 359 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 CNTN5O94779 1100 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 KCNH1O95259 989 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 TSPAN12O95859 305 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 HNRNPFP52597 415 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 ZNF140P52738 457 aaPredicted RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 PCBP2Q15366 365 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX3-201ENST00000230085 ZNF77Q15935 545 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 HIPK1Q86Z02 1210 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 PLPP6Q8IY26 295 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 ZCCHC7Q8N3Z6 543 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 RYBPQ8N488 228 aaPredicted RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 GLB1L3Q8NCI6 653 aaPredicted RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 SETD9Q8NE22 299 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 OR6Q1Q8NGQ2 317 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 CDKN2AIPNLQ96HQ2 116 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 NECAB3Q96P71 396 aaPredicted RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 TRIB3Q96RU7 358 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 RETREG1Q9H6L5 497 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 ATP13A3Q9H7F0 1226 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 C19orf67A6NJJ6 358 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 DRGXA6NNA5 263 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 STC2O76061 302 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 RHOBTB1O94844 696 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 MT-ND1P03886 318 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 EIF2B2P49770 351 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 RAD23AP54725 363 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 TSNQ15631 228 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 DEPDC1Q5TB30 811 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 TMEM53Q6P2H8 277 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 PLEKHG7Q6ZR37 379 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 CADM3Q8N126 398 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 FNDC5Q8NAU1 212 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 OR2T12Q8NG77 320 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 PDLIM5Q96HC4 596 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 RPL10LQ96L21 214 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 ZNF300Q96RE9 604 aaPredicted RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 HEPHQ9BQS7 1158 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 SP140LQ9H930 580 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 CPNE5Q9HCH3 593 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 THG1LQ9NWX6 298 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 ANKMY1Q9P2S6 941 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 WARS2Q9UGM6 360 aaKnown RBP20.06■□□□□ 0.8
SNX3-201ENST00000230085 IKZF3Q9UKT9 509 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 ZNF232Q9UNY5 417 aa20.06■□□□□ 0.8
SNX3-201ENST00000230085 CD40LGP29965 261 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 PIGAP37287 484 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 ECT2LQ008S8 904 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 FADDQ13158 208 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 KEAP1Q14145 624 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 CYP20A1Q6UW02 462 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 EID3Q8N140 333 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 OR7A2PQ8NGA2 310 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 DYNC2LI1Q8TCX1 351 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 CHAC2Q8WUX2 184 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 RHBDF1Q96CC6 855 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 OBP2AQ9NY56 170 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 NUDT4Q9NZJ9 180 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 UGT2A1Q9Y4X1 527 aa20.05■□□□□ 0.8
SNX3-201ENST00000230085 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 GREM1O60565 184 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 PRKD3O94806 890 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 CST1P01037 141 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 KLKB1P03952 638 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 PRDX3P30048 256 aaKnown RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 MAGEA2P43356 314 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 TBX4P57082 545 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 MAXP61244 160 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 SERINC3Q13530 473 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 SELPLGQ14242 412 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 TRIP4Q15650 581 aaPredicted RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 HIST2H2ACQ16777 129 aaPredicted RBP20.04■□□□□ 0.8
SNX3-201ENST00000230085 MEP1AQ16819 746 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 TUBA3EQ6PEY2 450 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 SLC44A3Q8N4M1 653 aa20.04■□□□□ 0.8
SNX3-201ENST00000230085 KIAA1958Q8N8K9 716 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms