RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 THRBP10828 461 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 P2RX3P56373 397 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 PPP2R2BQ00005 443 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 TRAF3Q13114 568 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 SIM2Q14190 667 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 TAF1AQ15573 450 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 GTDC1Q4AE62 458 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 SULT1C3Q6IMI6 304 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 ERAP2Q6P179 960 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 NECAB2Q7Z6G3 386 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 RBM23Q86U06 439 aaKnown RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 P2RY8Q86VZ1 359 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 DCP2Q8IU60 420 aaKnown RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 TRIM48Q8IWZ4 208 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 GALNT6Q8NCL4 622 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 CNIH3Q8TBE1 160 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 TDRD1Q9BXT4 1180 aaKnown RBP9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 HPS4Q9NQG7 708 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
HLA-DOA-201ENST00000229829 TYW5A2RUC4 315 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 TRIM64BA6NI03 449 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 F5H5T6 163 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 H0YAE9 185 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 CBX4O00257 560 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 FTH1P02794 183 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DNTTP04053 509 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ASGR1P07306 291 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ANXA6P08133 673 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 RAP2AP10114 183 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 PRKACAP17612 351 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 CRHBPP24387 322 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAPKAPK2P49137 400 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 HMGCS1Q01581 520 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 CTU2Q2VPK5 515 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 SPATS1Q496A3 300 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM171A1Q5VUB5 890 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 GOLGA7Q7Z5G4 137 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 TMEM179BQ7Z7N9 219 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 COLGALT2Q8IYK4 626 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 PHACTR4Q8IZ21 702 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DPP10Q8N608 796 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZNF382Q96SR6 550 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 GPR62Q9BZJ7 368 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 NSUN3Q9H649 340 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 TLR8Q9NR97 1041 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DNMT3BQ9UBC3 853 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 UBA2Q9UBT2 640 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 MAGEL2Q9UJ55 1249 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 BTBD3Q9Y2F9 522 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 TESMINQ9Y4I5 508 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 RAI2Q9Y5P3 530 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DNMT3AQ9Y6K1 912 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM172BPA6NC97 362 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 G3V2T6 193 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 SEC14L2O76054 403 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 VNN2O95498 520 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 HSMCR30P0CW71 290 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC2A4P14672 509 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 GGT1P19440 569 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 CR2P20023 1033 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 LPOP22079 712 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 MRPL19P49406 292 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DEFA1P59665 94 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DEFA3P59666 94 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 RPL38P63173 70 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 POU6F2P78424 691 aaPredicted RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 CHRNB3Q05901 458 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 GRSF1Q12849 480 aaKnown RBP eCLIP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 DPY19L1Q2PZI1 675 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ATAD3CQ5T2N8 411 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 LAIR2Q6ISS4 152 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 TXNDC11Q6PKC3 985 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 C16orf59Q7L2K0 433 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 KRTCAP2Q8N6L1 136 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 PCNPQ8WW12 178 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 EID2BQ96D98 161 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 MED30Q96HR3 178 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 FUBP3Q96I24 572 aaKnown RBP eCLIP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 PSD2Q9BQI7 771 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 THUMPD3Q9BV44 507 aaKnown RBP9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 NUAK2Q9H093 628 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 RERGLQ9H628 205 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ZFP14Q9HCL3 533 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 AMBNQ9NP70 447 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 RASSF1Q9NS23 344 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 SLC6A13Q9NSD5 602 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ENPP5Q9UJA9 477 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 INVSQ9Y283 1065 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 FAM92AA1XBS5 289 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 ANKRD66B4E2M5 251 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 PRSS23O95084 383 aa9.18□□□□□ -0.94
HLA-DOA-201ENST00000229829 GJB5O95377 273 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms