RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SVOPQ8N4V2 548 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 FAM86B1Q8N7N1 296 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 UTP15Q8TED0 518 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 OR8D1Q8WZ84 308 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PMM1Q92871 262 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 TDRD1Q9BXT4 1180 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 NKX2-4Q9H2Z4 354 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 SMOC2Q9H3U7 446 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PAQR5Q9NXK6 330 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 FXYD1O00168 92 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 OR4F21O95013 312 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 GOT2P00505 430 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 ITGB1P05556 798 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 AGTR2P50052 363 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PPP5CP53041 499 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 RAPSNQ13702 412 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 HIST2H2ACQ16777 129 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 GALNT12Q8IXK2 581 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ISL2Q96A47 359 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 MTFMTQ96DP5 389 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 CCDC177Q9NQR7 707 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 DCLK1O15075 740 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 KMOO15229 486 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PRDX3P30048 256 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 KRT6CP48668 564 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 TPRG1LQ5T0D9 272 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 CHST9Q7L1S5 443 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PHACTR4Q8IZ21 702 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 CELF2-AS1Q8N7Q2 184 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ASCC1Q8N9N2 400 aaKnown RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 OR7D4Q8NG98 312 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 ZBTB20Q9HC78 741 aaPredicted RBP11.26□□□□□ -0.61
CCND1-201ENST00000227507 TDP1Q9NUW8 608 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 PCDHB9Q9Y5E1 797 aa11.26□□□□□ -0.61
CCND1-201ENST00000227507 A8MX80 341 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CPNE6O95741 557 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 ALPLP05186 524 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 ZNF7P17097 686 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 TP53BP2Q13625 1128 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 DSC3Q14574 896 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 ZNF404Q494X3 552 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 HACD2Q6Y1H2 254 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 HID1Q8IV36 788 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 SETD9Q8NE22 299 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 RHNO1Q9BSD3 238 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 SYTL2Q9HCH5 934 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 UTS2RQ9UKP6 389 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 TARM1B6A8C7 271 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 PRMT5O14744 637 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 ARHGEF9O43307 516 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 HNRNPA1P09651 372 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCND1-201ENST00000227507 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 NUDT6P53370 316 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 GP2P55259 537 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 RPL38P63173 70 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 GALNT2Q10471 571 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 RAB33AQ14088 237 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 SELPLGQ14242 412 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 COL19A1Q14993 1142 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 UGT3A2Q3SY77 523 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 STEAP3Q658P3 488 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 DENND5AQ6IQ26 1287 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 OVCA2Q8WZ82 227 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 PTERQ96BW5 349 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 AURKBQ96GD4 344 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 DNAJB9Q9UBS3 223 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 OAS3Q9Y6K5 1087 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 ZW10O43264 779 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 ABCB1P08183 1280 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 MSH3P20585 1137 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 DGKGP49619 791 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 CAP1Q01518 475 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CREB5Q02930 508 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CLCA4Q14CN2 919 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 TXNDC11Q6PKC3 985 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 ISCA2Q86U28 154 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 CIR1Q86X95 450 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 HIPK1Q86Z02 1210 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 TRIM48Q8IWZ4 208 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 TBC1D19Q8N5T2 526 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 LSM14AQ8ND56 463 aaKnown RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 ERVK13-1Q9NX77 482 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 MARCH4Q9P2E8 410 aaPredicted RBP11.25□□□□□ -0.61
CCND1-201ENST00000227507 VPS4AQ9UN37 437 aa11.25□□□□□ -0.61
CCND1-201ENST00000227507 DFNA5O60443 496 aa11.24□□□□□ -0.61
CCND1-201ENST00000227507 UBL4AP11441 157 aa11.24□□□□□ -0.61
CCND1-201ENST00000227507 HLA-DPA1P20036 260 aa11.24□□□□□ -0.61
CCND1-201ENST00000227507 CCNCP24863 283 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms