RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SPEF1Q9Y4P9 236 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SLC16A6O15403 523 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 LDB2O43679 373 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 PCDHGA12O60330 932 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ATXN1LP0C7T5 689 aaKnown RBP13.76□□□□□ -0.21
SF1-201ENST00000227503 PRR35P0CG20 571 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 DDX5P17844 614 aaKnown RBP13.76□□□□□ -0.21
SF1-201ENST00000227503 SLC15A1P46059 708 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 MGAT3Q09327 533 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 PLEKHG6Q3KR16 790 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 MARC1Q5VT66 337 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 PAQR3Q6TCH7 311 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 NLRP8Q86W28 1048 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 TRNT1Q96Q11 434 aaKnown RBP13.76□□□□□ -0.21
SF1-201ENST00000227503 CDK2AP1O14519 115 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 RGS5O15539 181 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ZNF623O75123 536 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 MED26O95402 600 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 CSF2P04141 144 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 FDXRP22570 491 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 WEE1P30291 646 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 DEFA1P59665 94 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 DEFA3P59666 94 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ERVK-8P63133 956 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 TIGD6Q17RP2 521 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 RFTN2Q52LD8 501 aaPredicted RBP13.76□□□□□ -0.21
SF1-201ENST00000227503 ALFQ53S48 1182 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 FAAH2Q6GMR7 532 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 SPATA19Q7Z5L4 167 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 SVOPLQ8N434 492 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 TEX26Q8N6G2 289 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ARRDC2Q8TBH0 407 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 ABCG8Q9H221 673 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
SF1-201ENST00000227503 A0A1W2PQ72 361 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 WBP4O75554 376 aaKnown RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 RHOQP17081 205 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 CTSKP43235 329 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 NR6A1Q15406 480 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ANKS6Q68DC2 871 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 IL27RAQ6UWB1 636 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 ANKRD46Q86W74 232 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 KRTCAP2Q8N6L1 136 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 TTC29Q8NA56 475 aaPredicted RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 UBASH3BQ8TF42 649 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 PSMG2Q969U7 264 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 BRINP2Q9C0B6 783 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 TMEM248Q9NWD8 314 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ARL5AQ9Y689 179 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 TRPM7Q96QT4 1865 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ELOVL7A1L3X0 281 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 SMLR1H3BR10 107 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 GPR182O15218 404 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 AKR7A2O43488 359 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 CYP2A7P20853 494 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 CA5AP35218 305 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 SLC19A1P41440 591 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 RFX2P48378 723 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 MAD2L1BPQ15013 274 aaPredicted RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 FAM174BQ3ZCQ3 159 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 SPANXN2Q5MJ10 180 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 PAMR1Q6UXH9 720 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 FAM217AQ8IXS0 508 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 FBLIM1Q8WUP2 373 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ZNF599Q96NL3 588 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 NARFLQ9H6Q4 476 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 ZFP14Q9HCL3 533 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 SIRT5Q9NXA8 310 aa13.75□□□□□ -0.21
SF1-201ENST00000227503 UXTQ9UBK9 157 aaPredicted RBP13.75□□□□□ -0.21
SF1-201ENST00000227503 EVPLLA8MZ36 301 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 IGHA2P01877 340 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 JUNDP17535 347 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 CD52P31358 61 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 ACVR1Q04771 509 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 TUSC3Q13454 348 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 GPR50Q13585 617 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 MS4A13Q5J8X5 152 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 GPR153Q6NV75 609 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 SYCE2Q6PIF2 218 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 AMER2Q8N7J2 671 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 BLOC1S5Q8TDH9 187 aa13.74□□□□□ -0.21
SF1-201ENST00000227503 APH1BQ8WW43 257 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms