RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ADAMTSL2Q86TH1 951 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TTC29Q8NA56 475 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 EGFL8Q99944 293 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 DPH2Q9BQC3 489 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 MAGIXQ9H6Y5 334 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 IL37Q9NZH6 218 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 TNPO3Q9Y5L0 923 aaKnown RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 OR2A25A4D2G3 310 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 EFCAB9A8MZ26 197 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 H0Y626 953 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 PFDN6O15212 129 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 RGS10O43665 173 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 FAM20BO75063 409 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TRIM16O95361 564 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 VNN2O95498 520 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 EPORP19235 508 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 CD9P21926 228 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 PPP5CP53041 499 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 ZXDCQ2QGD7 858 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 CCDC92Q53HC0 331 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 ATAD3BQ5T9A4 648 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 DEPDC1Q5TB30 811 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 OR2T5Q6IEZ7 315 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TRIM46Q7Z4K8 759 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 RASAL3Q86YV0 1011 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 ARMC8Q8IUR7 673 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TRPV1Q8NER1 839 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 OR2T29Q8NH02 315 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TRIB2Q92519 343 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 DNASE1L2Q92874 299 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 ZHX1-C8orf76Q96EF9 292 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 SEPT5Q99719 369 aaPredicted RBP12.09□□□□□ -0.47
NUP88-201ENST00000225696 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 SLC45A1Q9Y2W3 748 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TMED5Q9Y3A6 229 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 TPRKBQ9Y3C4 175 aa12.09□□□□□ -0.47
NUP88-201ENST00000225696 PIKFYVEQ9Y2I7 2098 aa12.08□□□□□ -0.47
NUP88-201ENST00000225696 A6NL46 340 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 M0R082 166 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PSMD11O00231 422 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 GAPDHSO14556 408 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 RAD51BO15315 384 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 KDELR3O43731 214 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 NBNO60934 754 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PGLSO95336 258 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 GLUD1P00367 558 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PDYNP01213 254 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 VIPP01282 170 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 ZNF24P17028 368 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 OR1G1P47890 313 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 CRISP3P54108 245 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 IFITM2Q01629 132 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RFX4Q33E94 735 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 LRIF1Q5T3J3 769 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 CACHD1Q5VU97 1274 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 CLIP4Q8N3C7 705 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 OR6K2Q8NGY2 324 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PDLIM5Q96HC4 596 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 DACH2Q96NX9 599 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 SIGLEC11Q96RL6 698 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 CD244Q9BZW8 370 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 MAGEH1Q9H213 219 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 DCSTAMPQ9H295 470 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 EHD1Q9H4M9 534 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 IL1RAPQ9NPH3 570 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 IL17CQ9P0M4 197 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 ANGPTL3Q9Y5C1 460 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PCDHB9Q9Y5E1 797 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PABPN1LA6NDY0 278 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 UPK1BO75841 260 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RECQL5O94762 991 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 SLC25A14O95258 325 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 GJB5O95377 273 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 KLKB1P03952 638 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 S100BP04271 92 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 EFNA1P20827 205 aaPredicted RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 TCEA1P23193 301 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 SERPINB10P48595 397 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 RPP38P78345 283 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 TWF1Q12792 350 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 KEAP1Q14145 624 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 CLLU1OSQ5K130 101 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 PTRHD1Q6GMV3 140 aaKnown RBP12.08□□□□□ -0.48
NUP88-201ENST00000225696 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
NUP88-201ENST00000225696 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms