RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MGARPQ8TDB4 240 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 HRASLS2Q9NWW9 162 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 SPHK1Q9NYA1 384 aa26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 PTBP2Q9UKA9 531 aaKnown RBP26.37■■□□□ 1.81
CHMP4B-201ENST00000217402 GSAPA4D1B5 854 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 OR5K3A6NET4 321 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 KLK8O60259 260 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 CPA3P15088 417 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 GDF5P43026 501 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 CAPZBP47756 277 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 HSPA7P48741 367 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 ACADVLP49748 655 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 ALDH18A1P54886 795 aaKnown RBP26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 PTCHD3Q3KNS1 767 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 KLHL35Q6PF15 583 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 LRRC56Q8IYG6 542 aaPredicted RBP26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 RDH11Q8TC12 318 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 COPG2Q9UBF2 871 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 MID2Q9UJV3 735 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 ASB1Q9Y576 335 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 RPLP0P05388 317 aaKnown RBP26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 KCNA4P22459 653 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 ATP5F1P24539 256 aaPredicted RBP26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 ETV4P43268 484 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 SETDB1Q15047 1291 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 HMGCLL1Q8TB92 370 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 SMPDL3AQ92484 453 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 NCSTNQ92542 709 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 CCDC177Q9NQR7 707 aaPredicted RBP26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 NKIRAS1Q9NYS0 192 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 TMCO1Q9UM00 188 aa26.36■■□□□ 1.81
CHMP4B-201ENST00000217402 PIPSLA2A3N6 862 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 LRRC14BA6NHZ5 514 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 ZW10O43264 779 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 DUX1O43812 170 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 SIX3O95343 332 aaPredicted RBP26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PSMB5P28074 263 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PEBP1P30086 187 aaKnown RBP26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PPP1CAP62136 330 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 CCL7P80098 99 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 GPLD1P80108 840 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PRKAA1Q13131 559 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PCLAFQ15004 111 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 TRIP6Q15654 476 aaKnown RBP26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 THEMIS2Q5TEJ8 643 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 ARMC6Q6NXE6 501 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 USP53Q70EK8 1073 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 OR56A3Q8NH54 315 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 MECRQ9BV79 373 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 ACAT2Q9BWD1 397 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 SLC32A1Q9H598 525 aa26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 PTPRZ1P23471 2315 aaPredicted RBP26.35■■□□□ 1.81
CHMP4B-201ENST00000217402 ISM1B1AKI9 464 aa26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 CD1CP29017 333 aa26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 PAIP2Q9BPZ3 127 aaKnown RBP26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 CNOT10Q9H9A5 744 aaKnown RBP26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 ACSS2Q9NR19 701 aa26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 CDV3Q9UKY7 258 aaKnown RBP26.34■■□□□ 1.81
CHMP4B-201ENST00000217402 ASXL3Q9C0F0 2248 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 RP1P56715 2156 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 A0A1W2PPV9 198 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 CCNT2O60583 730 aaKnown RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 IPO13O94829 963 aaKnown RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 WDR47O94967 919 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 GP1BAP07359 652 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 EEF1DP29692 281 aaKnown RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 SLC6A12P48065 614 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 NFKB2Q00653 900 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 CAPN13Q6MZZ7 669 aaPredicted RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 IRGCQ6NXR0 463 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 RAB44Q7Z6P3 723 aaPredicted RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 C10orf107Q8IVU9 208 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 UBTD2Q8WUN7 234 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 CD244Q9BZW8 370 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 LRRN3Q9H3W5 708 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 EPB41L1Q9H4G0 881 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 INTS7Q9NVH2 962 aaKnown RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 ACTR10Q9NZ32 417 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 TAC3Q9UHF0 121 aa26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 ATXN7L1Q9ULK2 861 aaPredicted RBP26.33■■□□□ 1.81
CHMP4B-201ENST00000217402 A0A1W2PQM1 296 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 C2orf74A8MZ97 194 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 STK16O75716 305 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 CSF2RBP32927 897 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 GGT5P36269 586 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 PPP2R2AP63151 447 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 SLC22A9Q8IVM8 553 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 MDM1Q8TC05 714 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 NUDT22Q9BRQ3 303 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 SGPP1Q9BX95 441 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 SLC22A14Q9Y267 594 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 STX16-NPEPL1H3BU86 382 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 STX16O14662 325 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 UGT2B7P16662 529 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 NR1D1P20393 614 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 ALDH3A1P30838 453 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 SERPINB4P48594 390 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 SLC18A1P54219 525 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 GFERP55789 205 aa26.32■■□□□ 1.8
CHMP4B-201ENST00000217402 KIR2DS3Q14952 304 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms