RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RNF145Q96MT1 663 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 TSSK3Q96PN8 268 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 FAM83CQ9BQN1 747 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 UGT2B28Q9BY64 529 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ANKRD60Q9BZ19 345 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 DEC1Q9P2X7 70 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 PADI4Q9UM07 663 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 INVSQ9Y283 1065 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ITM2BQ9Y287 266 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ARHGAP10A1A4S6 786 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 NPIPB8E9PQR5 432 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SGTAO43765 313 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 RASAL1O95294 804 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 CISD3P0C7P0 127 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 RAP2AP10114 183 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ATP6V1B1P15313 513 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF23P17027 643 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 BDKRB1P46663 353 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 PREPP48147 710 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 CCR3P51677 355 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 CTSCP53634 463 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 PFN3P60673 137 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ABRQ12979 859 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 CAMK1Q14012 370 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ELAVL3Q14576 367 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 AAK1Q2M2I8 961 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 XKR6Q5GH73 641 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM220Q6QAJ8 160 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ISLR2Q6UXK2 745 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 MSANTD1Q6ZTZ1 278 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 GPR180Q86V85 440 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 THOC6Q86W42 341 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 RASGEF1AQ8N9B8 481 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 OR10A6Q8NH74 314 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 STARD8Q92502 1023 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 NELL1Q92832 810 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 FAM162AQ96A26 154 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SDCCAG3Q96C92 435 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 NUS1Q96E22 293 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 RMND5BQ96G75 393 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 APOLD1Q96LR9 279 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ADI1Q9BV57 179 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 USP22Q9UPT9 525 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 MYRFQ9Y2G1 1151 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 DLGAP4Q9Y2H0 992 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 A0A096LPI6 279 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ELOVL7A1L3X0 281 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SERTM1A2A2V5 107 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM202A6NGA9 273 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 FAM220BPB1ANY3 271 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 H3BM21 787 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 PDLIM1O00151 329 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 EI24O14681 340 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 MAP3K13O43283 966 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 AHCYL1O43865 530 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 MYO1DO94832 1006 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SDC1P18827 310 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 HNF4AP41235 474 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 VIPR2P41587 438 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 GRIA2P42262 883 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 GPR1P46091 355 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 NEK2P51955 445 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 NAE1Q13564 534 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 DDX39BQ13838 428 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 GK3PQ14409 553 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 PGS1Q32NB8 556 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SLC44A4Q53GD3 710 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 GRHL2Q6ISB3 625 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 AGTRAPQ6RW13 159 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF765Q7L2R6 523 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SPRED2Q7Z698 418 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SPRED1Q7Z699 444 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SATL1Q86VE3 508 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 TRAPPC5Q8IUR0 188 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SYT12Q8IV01 421 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 C7orf61Q8IZ16 206 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SLC22A15Q8IZD6 547 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF548Q8NEK5 533 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 TESCQ96BS2 214 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 FAM120BQ96EK7 910 aaKnown RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 CHID1Q9BWS9 393 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 KCNH6Q9H252 994 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
VAMP3-201ENST00000054666 STOX2Q9P2F5 926 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-201ENST00000054666 SLC5A10A0PJK1 596 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 KRT87PA6NCN2 255 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 E7EQ34 232 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 C1QTNF3-AMACRE9PGA6 284 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 RFXANKO14593 260 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 PRMT3O60678 531 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 SCELO95171 688 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 H6PDO95479 791 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 FESP07332 822 aa8.02□□□□□ -1.13
VAMP3-201ENST00000054666 HSD3B1P14060 373 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms