RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 COLEC12Q5KU26 742 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 OR4F3Q6IEY1 312 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 SHQ1Q6PI26 577 aaKnown RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 PLEKHG7Q6ZR37 379 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ADGRG2Q8IZP9 1017 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 Q8N9G6 341 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 FAM126AQ9BYI3 521 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 RNF167Q9H6Y7 350 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ASB8Q9H765 288 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 TPRKBQ9Y3C4 175 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 SLC28A1O00337 649 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 VIPP01282 170 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 KRT20P35900 424 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 RPS14P62263 151 aaKnown RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 ZXDBP98169 803 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 CREMQ03060 361 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 CACNG1Q06432 222 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 SELENBP1Q13228 472 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 ACOX1Q15067 660 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 PLPP6Q8IY26 295 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 S100ZQ8WXG8 99 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 ITPKCQ96DU7 683 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 SH3GL1Q99961 368 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 EBPLQ9BY08 206 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 SLIRPQ9GZT3 109 aaKnown RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
USH1C-201ENST00000005226 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
USH1C-201ENST00000005226 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 RGS10O43665 173 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 ST13P50502 369 aaKnown RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 FCGRTP55899 365 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 C1QTNF12Q5T7M4 302 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 AGAP7PQ5VUJ5 663 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ATG9BQ674R7 924 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 OR2T5Q6IEZ7 315 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 PLD3Q8IV08 490 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 OR2T29Q8NH02 315 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 CORO1BQ9BR76 489 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 SIAEQ9HAT2 523 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 Q9Y3F1 56 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 HTTP42858 3142 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 A0A096LPI6 279 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 GAPDHSO14556 408 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 TBX1O43435 398 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 SH3BGRLO75368 114 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 FKBP9O95302 570 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ASGR1P07306 291 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ITGAMP11215 1152 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 SPNP16150 400 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 GTF2E2P29084 291 aaKnown RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 PTPN6P29350 595 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 CD40LGP29965 261 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 C21orf33P30042 268 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 CDH4P55283 916 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 RING1Q06587 406 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 DSC1Q08554 894 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 FKBP9P1Q75LS8 142 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 MCFD2Q8NI22 146 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 ELMO1Q92556 727 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 APIPQ96GX9 242 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 FAM193BQ96PV7 902 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 DSN1Q9H410 356 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 NECTIN3Q9NQS3 549 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 KIAA1522Q9P206 1035 aaPredicted RBP13.67□□□□□ -0.22
USH1C-201ENST00000005226 OARD1Q9Y530 152 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 PCDHGB1Q9Y5G3 927 aa13.67□□□□□ -0.22
USH1C-201ENST00000005226 M0QX08 132 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 PCDHGA12O60330 932 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 PGLSO95336 258 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 EPB42P16452 691 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 EPORP19235 508 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 LIPAP38571 399 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 MAD2L1BPQ15013 274 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 ZXDCQ2QGD7 858 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 NCEH1Q6PIU2 408 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 TAS1R1Q7RTX1 841 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 TRIM46Q7Z4K8 759 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 SELENOMQ8WWX9 145 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 PROX1Q92786 737 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 PDLIM5Q96HC4 596 aaKnown RBP13.66□□□□□ -0.22
USH1C-201ENST00000005226 PSD2Q9BQI7 771 aa13.66□□□□□ -0.22
USH1C-201ENST00000005226 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms