RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Dhrs7Q9CXR1 338 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Erap1Q9EQH2 930 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Prokr1Q9JKL1 393 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn2r8L7N472 848 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Akap3O88987 864 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Oas1aP11928 367 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 TfamP40630 243 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dsc3P55850 896 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cxcr5Q04683 374 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Spata48Q5NC83 441 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rnf43Q5NCP0 784 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 DgkbQ6NS52 802 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Txndc15Q6P6J9 344 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Trim17Q7TPM3 477 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn2r81Q80Z09 865 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rab39aQ8BHD0 217 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tbl3Q8C4J7 801 aaKnown RBP11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ftsj1Q8CBC7 324 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ccdc17Q8CE13 565 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Bdh2Q8JZV9 245 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Akr1c20Q8VC77 323 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Asz1Q8VD46 475 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Retreg1dQ8VE91 480 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 SelenomQ8VHC3 145 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ly6kQ9CWP4 154 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gpr63Q9EQQ3 425 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tgm1Q9JLF6 815 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hacl1Q9QXE0 581 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rad18Q9QXK2 509 aaKnown RBP11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc43a3A2AVZ9 502 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Krt28A6BLY7 462 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm5415E9PXF3 478 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ech1O35459 327 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 FiglaO55208 194 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyp21P03940 487 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Folr1P35846 255 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Prickle1Q3U5C7 832 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 P2rx5Q3UYI1 455 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Sfmbt2Q5DTW2 938 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 PtprnQ60673 979 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pxylp1Q8BHA9 480 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Znf473Q8BI67 892 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Serpinb9dQ8BMT0 377 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Steap3Q8CI59 488 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn1r18Q8R2C8 299 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam20bQ8VCS3 409 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dppa5aQ9CQS7 118 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fcf1Q9CTH6 198 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 D10Jhu81eQ9D172 266 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 PyurfQ9D1C3 112 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Galk1Q9R0N0 392 aa11.31□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1247A2AT78 314 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 SelenovD3YXG1 328 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Alkal1J3QPP8 127 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 1700122O11RikJ3QPW6 241 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hsd17b10O08756 261 aaKnown RBP11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Matn3O35701 481 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Elovl3O35949 271 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 AmbnO55189 407 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 LckP06240 509 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MndaP0DOV1 425 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Arhgap39P59281 1107 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hpcal1P62748 193 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 ArvcfP98203 962 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nr1d2Q60674 576 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 RhocQ62159 193 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 ManealQ6P1J0 452 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tigd4Q8BUZ3 513 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm5591Q8CDK1 855 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Glis1Q8K1M4 789 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 PolbQ8K409 335 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Q99LU8 229 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyp4f3Q99N16 524 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmeff2Q9QYM9 374 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vps13aQ5H8C4 3166 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 FanceB8JJD6 213 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rhox2hK7N6P1 191 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Sh3yl1O08641 340 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gnpda1O88958 289 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MaptP10637 733 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Kcnj9P48543 393 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vipr1P97751 459 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dok6Q2MHE5 331 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmem181aQ3U3W2 474 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Zfp560Q3URI6 754 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hesx1Q61658 185 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 HiraQ61666 1015 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nudcd1Q6PIP5 582 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 1700001J03RikQ80ZR8 219 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hyal5Q812F3 526 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tspan12Q8BKT6 305 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nudt4Q8R2U6 179 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rnf8Q8VC56 488 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cbr4Q91VT4 236 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dsn1Q9CYC5 348 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Armc8Q9DBR3 673 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Prmt1Q9JIF0 371 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cog8Q9JJA2 640 aa11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Maged1Q9QYH6 775 aaKnown RBP11.3□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Spint1Q9R097 507 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms