RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Uckl1Q91YL3 548 aa9.65□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cmpk1Q9DBP5 196 aa9.65□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr1508Q9R0K4 310 aa9.65□□□□□ -0.87
Syne1-201ENSMUST00000041639 Coro1bQ9WUM3 484 aaKnown RBP9.65□□□□□ -0.87
Syne1-201ENSMUST00000041639 Clic1Q9Z1Q5 241 aaKnown RBP9.65□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fabp1P12710 127 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Q3UST5 385 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Snap91Q61548 901 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Nup62Q63850 526 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Clec4b1Q7TS58 209 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fam96aQ9DCL2 160 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 GnmtQ9QXF8 293 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ing1Q9QXV3 279 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cldn9Q9Z0S7 217 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr49Q9Z1V0 313 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slit3Q9WVB4 1523 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Trbv4A0A075B5I2 113 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 H2-T24F8VQG4 363 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 B3galt2O54905 422 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Mid1O70583 680 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gon7P0C8B4 98 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cxcr2P35343 359 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Lrfn1Q2WF71 766 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 B3gntl1Q3U129 357 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Mtmr11Q3V1L6 700 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Spin1Q61142 262 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Dlx3Q64205 287 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Serpina3aQ6P4P1 422 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Scgb2b2Q6UGQ3 114 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 BoraQ8BS90 525 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ap3s2Q8BSZ2 193 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Lrif1Q8CDD9 755 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cacul1Q8R0X2 377 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fastkd2Q922E6 689 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ogfod2Q9CQ04 349 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fam90a1bQ9D4F3 419 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Q9D4W2 315 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ccdc3Q9D6Y1 273 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Capns2Q9D7J7 247 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 SqorQ9R112 450 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr1145A2AVC7 325 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Zfp963D3Z2T8 383 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm8229K7N749 213 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 FshrP35378 692 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rbm15Q0VBL3 962 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Znf367Q0VDT2 340 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Kcna7Q17ST2 489 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 GstcdQ5RL51 634 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Alkbh2Q6P6J4 239 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr1308Q7TQX0 320 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 4933430I17RikQ8BHW4 495 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Arel1Q8CHG5 823 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr809Q8VEX8 328 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Barhl2Q8VIB5 384 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Mat1aQ91X83 396 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Dsn1Q9CYC5 348 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Spatc1lQ9D9W0 342 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sertad3Q9ERC3 197 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Myh11O08638 1972 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Phf11bB4XVQ1 276 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr741L7N1Y5 311 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rps6ka3P18654 740 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ppm1bP36993 390 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Taar7dQ5QD10 358 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fndc3bQ6NWW9 1207 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sult1c1Q80VR3 304 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Q8BHB7 409 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Acot4Q8BWN8 421 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Arfrp1Q8BXL7 201 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr371Q8VGB8 312 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr683Q8VGV1 319 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 NoboxQ8VIH1 527 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cstf1Q99LC2 431 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pole4Q9CQ36 118 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rbm18Q9CR83 190 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cdkn2aipnlQ9D211 116 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 NtsQ9D3P9 169 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cldn22Q9D7U6 220 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sppl2aQ9JJF9 523 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Smok1Q9QYZ4 484 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Padi4Q9Z183 666 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 DccP70211 1447 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Dpysl2O08553 572 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fkbp7O54998 218 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 CyctP00015 105 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rab8aP55258 207 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pyroxd2Q3U4I7 581 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Lingo2Q3URE9 606 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 PterQ60866 349 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Il17cQ8K4C5 194 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Trim2Q9ESN6 744 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Abca17E9PX95 1733 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Spata31d1aE9QA35 1336 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm20441G3UYJ7 252 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slc22a8O88909 537 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ptger1P35375 405 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Mat2aQ3THS6 395 aaKnown RBP9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Bpifb1Q61114 474 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Vat1Q62465 406 aa9.64□□□□□ -0.87
Syne1-201ENSMUST00000041639 Tha1Q6XPS7 400 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms