RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Capns2Q9D7J7 247 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pbld1Q9DCG6 288 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sac3d1A6H687 427 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 GzmgP13366 248 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 CenpcP49452 906 aaKnown RBP16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Kif18bQ6PFD6 834 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem209Q8BRG8 561 aaKnown RBP16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zbtb26Q8C8S0 451 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Angptl7Q8R1Q3 337 aa16.29■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm21897J3KMP5 500 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm21750L7N228 499 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cstf2Q8BIQ5 580 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 ArskQ9D2L1 553 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 5330417H12RikQ9D3P2 110 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sult1c2Q9D939 296 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 EqtnQ9D9V2 337 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ahnak2E9PYB0 1738 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Irf1P15314 329 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem173Q3TBT3 378 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Coq10bQ3THF9 240 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Arhgap20Q6IFT4 1182 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Smarcd3Q6P9Z1 483 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Syt15Q8C6N3 418 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mdm1Q9D067 708 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 C3P01027 1663 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Znf366Q6NS86 746 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 HjurpQ6PG16 667 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Lactbl1S4R213 581 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm13101A2ASJ0 481 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ptar1E9QAB6 424 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gp5O08742 567 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ebf3O08791 596 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Serpine1P22777 402 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ctps1P70698 591 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Dgat2Q9DCV3 388 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Nek7Q9ES74 302 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ttc39aA2ACP1 578 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp105G3X9I0 524 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Capn1O35350 713 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Rad18Q9QXK2 509 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 N4bp2F8VQG7 1678 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cyp4a30bA0A087WS15 508 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Wscd2D4PHA7 571 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vmn2r90E9PXJ8 863 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 StomP54116 284 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 FcamrQ2TB54 535 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Prap1Q80XD8 149 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gtf2a2Q80ZM7 109 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Insig1Q8BGI3 259 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pofut2Q8VHI3 429 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Q9CQC3 228 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Lpcat2bQ9D5U0 516 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cldn22Q9D7U6 220 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 IcmtQ9EQK7 283 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Prokr1Q9JKL1 393 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Bmp10Q9R229 421 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Uhrf2Q7TMI3 803 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Apoa5Q8C7G5 368 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Vmn1r219Q8R271 312 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp810Q99K45 461 aa16.28■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pbx1P41778 430 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PctpP53808 214 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Scarf2P59222 833 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 HecaQ3V1N5 544 aaKnown RBP16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Uimc1Q5U5Q9 727 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zc3h11aQ6NZF1 792 aaKnown RBP16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Taf1cQ6PDZ2 836 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc51aQ8R000 340 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PpcsQ8VDG5 311 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp60P16374 707 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ckmt1P30275 418 aaKnown RBP16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Diras2Q5PR73 199 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 RbfaQ6P3B9 350 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Neto2Q8BNJ6 525 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Lpin3Q99PI4 848 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Actl7bQ9QY83 418 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Atp6ap1lD3Z5W0 336 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Col6a2Q02788 1034 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Scaf8Q6DID3 1268 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pramel7Q810Y8 479 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gpihbp1Q9D1N2 228 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Htr3bQ9JHJ5 437 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm21973F6WEZ7 68 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PrnpP04925 254 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Pecam1Q08481 727 aaKnown RBP16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cadm2Q8BLQ9 435 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 DlstQ9D2G2 454 aa16.27■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm42372A0A1B0GT27 204 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm4985A2ALC6 410 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Zfp712E9PXJ4 705 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mboat4P0C7A3 435 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 OsgepQ8BWU5 335 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Krcc1Q99JT5 256 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Eif2b3B1AUN2 452 aaKnown RBP16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Limk2O54785 638 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Shox2P70390 331 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Atp5jP97450 108 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Znf276Q8CE64 614 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dnajc19Q9CQV7 116 aa16.27■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Prl8a8Q9DAS4 241 aa16.27■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms