RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 FaddQ61160 205 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Kctd9Q80UN1 339 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mgat4bQ812F8 548 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 RhbgQ8BUX5 455 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ago1Q8CJG1 857 aaKnown RBP13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp940Q8R2Q3 566 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr679Q8VGV0 315 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Med28Q920D3 178 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Grip1Q925T6 1127 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 NenfQ9CQ45 171 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm16286Q9CQX6 220 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tmem41aQ9D8U2 264 aa13.71□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm37596A0A0A6YXL2 336 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Smim10l2aA0A0B4J1F8 78 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 CtssO70370 340 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mc4rP56450 332 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fitm2P59266 262 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tbx5P70326 518 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fdxacb1Q3UY23 622 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Lix1Q6P566 282 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Naaladl1Q7M758 745 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dnajc16Q80TN4 772 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cars2Q8BYM8 551 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cers6Q8C172 384 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Trnt1Q8K1J6 434 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm2035J3QP87 144 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Lhx5P61375 402 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rps3P62908 243 aaKnown RBP13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Irf6P97431 467 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Snai1Q02085 264 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Acot4Q8BWN8 421 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 PhykplQ8R1K4 467 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ppp1r14aQ91VC7 147 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mri1Q9CQT1 369 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tbc1d21Q9D9D3 336 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm4756A0A140LIS8 335 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gm10271F6WY25 52 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 P06324 132 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sept4P28661 478 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Entpd3Q8BFW6 529 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ccdc126Q8BIS8 140 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Fam92aQ8BP22 355 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nob1Q8BW10 403 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mamdc2Q8CG85 686 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mul1Q8VCM5 352 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Glod5Q9D8I3 148 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tomm20Q9DCC8 145 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Upf1Q9EPU0 1124 aaKnown RBP13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Gtf2h2Q9JIB4 396 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Psma1Q9R1P4 263 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Abca14E9Q8F8 1683 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Per3O70361 1113 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 CebpaP53566 359 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Clns1aQ61189 236 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr1105Q7TR58 312 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr867Q7TRF3 331 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ccdc142Q8CAI1 738 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 FntbQ8K2I1 437 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ak5Q920P5 562 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rasgef1cQ9D300 466 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Bag6Q9Z1R2 1154 aaKnown RBP13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pnpla6Q3TRM4 1355 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 2610028H24RikG5E8K1 270 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 MndaP0DOV1 425 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rplp0P14869 317 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Defa11P50709 85 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Perm1Q149B8 807 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dtx3lQ3UIR3 748 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dcdc2Q5DU00 475 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Spon1Q8VCC9 807 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pofut2Q8VHI3 429 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Trem2Q99NH8 227 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Lactbl1S4R213 581 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Klhl15A2AAX3 604 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dhtkd1A2ATU0 921 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mc1rQ01727 315 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mvb12bQ6KAU4 317 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Snx31Q6P8Y7 439 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Angptl6Q8R0Z6 457 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Agpat5Q9D1E8 365 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Htr3bQ9JHJ5 437 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Smok1Q9QYZ4 484 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Slc22a1O08966 556 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Casp9Q8C3Q9 454 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Kctd5Q8VC57 234 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Pole4Q9CQ36 118 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Dnajc5bQ9CQ94 199 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Aar2Q9D2V5 384 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Sult1c2Q9D939 296 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ift43Q9DA69 206 aa13.7□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mterf1bB9EJ57 379 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Oaz2O08608 189 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nat1P50294 290 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cpne9Q1RLL3 553 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Zfp866Q6PGD2 520 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Cxcr1Q810W6 351 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Mterf1aQ8CHZ9 379 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Ints14Q8R3P6 515 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Atg13Q91YI1 516 aa13.69□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Arfgap3Q9D8S3 523 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms