RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Zswim1Q9CWV7 455 aaKnown RBP8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 FancgQ9EQR6 623 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 C1qtnf3Q9ES30 246 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CerklA2AQH1 525 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm4775F7ANJ3 135 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r21K7N6Y7 853 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r20L7N2B1 853 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm6502L7N456 481 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mrps6P58064 125 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 A1bgQ19LI2 512 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pdap1Q3UHX2 181 aaKnown RBP8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Prss53Q571E5 552 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Enpp3Q6DYE8 874 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ptx4Q6RUU0 478 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Paqr3Q6TCG8 311 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Arhgap12Q8C0D4 838 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tnfaip8l1Q8K288 186 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ints14Q8R3P6 515 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nsmce2Q91VT1 247 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Use1Q9CQ56 270 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fis1Q9CQ92 152 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gkn2Q9CQS6 184 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam227aQ9D3V8 625 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rcan2Q9JHG2 197 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Abcb9Q9JJ59 762 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Adam24Q9R160 761 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 VarsQ9Z1Q9 1263 aaKnown RBP8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Scgb2b17S4R2V3 82 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Spdye4cI6XKQ3 339 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 AcrP23578 436 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Eif4ebp2P70445 120 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pde7aP70453 456 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Bpifb1Q61114 474 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Il17aQ62386 158 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gpbp1l1Q6NZP2 473 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Stk32cQ8QZV4 488 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Abtb1Q99LJ2 478 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nudt7Q99P30 236 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CenpnQ9CZW2 337 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Necab3Q9D6J4 353 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zfp952B0V2W4 504 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Suv39h1O54864 412 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CatP24270 527 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nedd8P29595 81 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Kcnh6Q32ME0 950 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Il10raQ61727 575 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pkp4Q68FH0 1190 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tmem151aQ6GQT5 468 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mfn2Q80U63 757 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Oscp1Q8BHW2 379 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PdhxQ8BKZ9 501 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tram1l1Q8QZR0 363 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mapre2Q8R001 326 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PyurfQ9D1C3 112 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Uba7Q9DBK7 977 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mrpl46Q9EQI8 283 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rnf11Q9QYK7 154 aa8.29□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam71f2B2RXB0 297 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fbxw9F8VPX2 458 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Trim15G3UY57 292 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dsc1P55849 886 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Npy2rP97295 381 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 SirpaP97797 513 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Smim24Q0VG18 120 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ei24Q61070 340 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Wnt8aQ64527 354 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tas2r38Q7TQA6 331 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr855Q7TRF8 312 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Wipi2Q80W47 445 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Coq4Q8BGB8 266 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tyw1Q8BJM7 721 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gpr22Q8BZL4 432 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 RorbQ8R1B8 470 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 HnrnpabQ99020 285 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PgcQ9D7R7 392 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Asap1Q9QWY8 1147 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dnajb9Q9QYI6 222 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Klhl18A0A0G2JGN5 579 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zscan4eA0A1B0GRE8 505 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1253A2AUA2 318 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Itih4A6X935 942 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm4847G3X946 537 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 P01636 108 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hoxa4P06798 285 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rab23P35288 237 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nudt2P56380 147 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nudcd1Q6PIP5 582 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Wfikkn2Q7TQN3 571 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr1251Q7TQZ3 318 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gpr62Q80UC6 358 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zbtb24Q80X44 710 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fut11Q8BHC9 489 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam180aQ8BR21 173 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hat1Q8BY71 416 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Parp12Q8BZ20 711 aaKnown RBP8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gprc6aQ8K4Z6 928 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc29a4Q8R139 528 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cys1Q8R4T1 145 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 HpgdQ8VCC1 269 aa8.28□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 NclnQ8VCM8 563 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms