RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 WDR55Q9H6Y2 383 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-221ENST00000641573 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 TCF7L2Q9NQB0 619 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 MOSPD1Q9UJG1 213 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 WASF3Q9UPY6 502 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 STK38LQ9Y2H1 464 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
PHGDH-221ENST00000641573 KLHL33A6NCF5 533 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 KRT87PA6NCN2 255 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SDHDO14521 159 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 C1orf105O95561 183 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ESRRBO95718 433 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SERPINA6P08185 405 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ACP5P13686 325 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 KELP23276 732 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ACADLP28330 430 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 EPHA3P29320 983 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PRDX3P30048 256 aaKnown RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 GNPDA1P46926 289 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SLC6A12P48065 614 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PIK3CGP48736 1102 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 INHBCP55103 352 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 FOXA1P55317 472 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PFN3P60673 137 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 DMPKQ09013 629 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SPRED3Q2MJR0 410 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PYCR3Q53H96 274 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 METRNLQ641Q3 311 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 UNC5DQ6UXZ4 953 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 GCNT7Q6ZNI0 430 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 CHST15Q7LFX5 561 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 LRRC70Q7Z2Q7 622 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 FBXO15Q8NCQ5 510 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 OR52B6Q8NGF0 335 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 RLN3Q8WXF3 142 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ATL1Q8WXF7 558 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ATP6V1E2Q96A05 226 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SCARF2Q96GP6 870 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 PKP4Q99569 1192 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ZDHHC5Q9C0B5 715 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SLC32A1Q9H598 525 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 IPPKQ9H8X2 491 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 MEAF6Q9HAF1 191 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
PHGDH-221ENST00000641573 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 ZNF225Q9UK10 706 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 GPSM3Q9Y4H4 160 aa12.75□□□□□ -0.37
PHGDH-221ENST00000641573 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 H0Y8X5 98 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 TAF4O00268 1085 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 KCNJ13O60928 360 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 WDR47O94967 919 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 OR4F21O95013 312 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 OTCP00480 354 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 UROSP10746 265 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 EPB42P16452 691 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 ARL1P40616 181 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 CCNG1P51959 295 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 YPEL5P62699 121 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 BNIP1Q12981 228 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 ZXDCQ2QGD7 858 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 PTCHD3Q3KNS1 767 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 LSM12Q3MHD2 195 aaKnown RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 PLK5Q496M5 336 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 FAM91A1Q658Y4 838 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 NXNQ6DKJ4 435 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 EFL1Q7Z2Z2 1120 aaKnown RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 MILR1Q7Z6M3 343 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 SNX31Q8N9S9 440 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 TWIST2Q8WVJ9 160 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 OR1E3Q8WZA6 343 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 BIRC7Q96CA5 298 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 MAELQ96JY0 434 aaKnown RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 CDK15Q96Q40 435 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 NUSAP1Q9BXS6 441 aaKnown RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 ATG10Q9H0Y0 220 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 SAR1AQ9NR31 198 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 STOX2Q9P2F5 926 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-221ENST00000641573 CIDEBQ9UHD4 219 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 PLEKHM1Q9Y4G2 1056 aa12.74□□□□□ -0.37
PHGDH-221ENST00000641573 TIMM22Q9Y584 194 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms