RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PFDN4Q9NQP4 134 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PRDM6Q9NQX0 595 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CNOT11Q9UKZ1 510 aaKnown RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CYP8B1Q9UNU6 501 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 GPSM3Q9Y4H4 160 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 XIRP2A4UGR9 3374 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 A0A1B0GTL3 188 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 C17orf113A0A1B0GUU1 675 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ATP6AP2A0A1C7CYW4 349 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 DYTNA2CJ06 578 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SHISA7A6NL88 538 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 FAM170BA6NMN3 283 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 BBIP1A8MTZ0 92 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 MEI4A8MW99 385 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 OR7A17O14581 309 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CLGNO14967 610 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PIP5K1BO14986 540 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SCAMP1O15126 338 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PSIP1O75475 530 aaKnown RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ATP6AP2O75787 350 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 BCAS2O75934 225 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 MATN4O95460 622 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SEMA4FO95754 770 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CAPN1P07384 714 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CHRNB1P11230 501 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ACP5P13686 325 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 HGFP14210 728 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ITPKAP23677 461 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TEAD1P28347 426 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 GNPDA1P46926 289 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 HNMTP50135 292 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CLDN2P57739 230 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SESN3P58005 492 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ERVPABLB-1P60509 514 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PLOD1Q02809 727 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 STX5Q13190 355 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PTK2BQ14289 1009 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SGO1Q5FBB7 561 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 COQ5Q5HYK3 327 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CDKL4Q5MAI5 379 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM198Q66K66 360 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 OR52E8Q6IFG1 317 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TTC23LQ6PF05 361 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 IZUMO2Q6UXV1 221 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 FAM83HQ6ZRV2 1179 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CHST15Q7LFX5 561 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 LRRC70Q7Z2Q7 622 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SNX32Q86XE0 403 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 GALNT13Q8IUC8 556 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ADHFE1Q8IWW8 467 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 KBTBD2Q8IY47 623 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SIX5Q8N196 739 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 GOLM1Q8NBJ4 401 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ADCY4Q8NFM4 1077 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TSTD1Q8NFU3 115 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 OR4F6Q8NGB9 312 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 METTL6Q8TCB7 284 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TSPEARQ8WU66 669 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ATL1Q8WXF7 558 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 FAM131CQ96AQ9 280 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PYCR2Q96C36 320 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 FBXL8Q96CD0 374 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 TUBGCP3Q96CW5 907 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 LINC00615Q96LM1 132 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CCDC138Q96M89 665 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 HHIPQ96QV1 700 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 NUSAP1Q9BXS6 441 aaKnown RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 KLHL4Q9C0H6 718 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 ACTR8Q9H981 624 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SGK2Q9HBY8 427 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 SUCOQ9UBS9 1254 aaKnown RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 CA5BQ9Y2D0 317 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PCYT1BQ9Y5K3 369 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-219ENST00000641513 PTGDR2Q9Y5Y4 395 aa8.62□□□□□ -1.03
PHGDH-219ENST00000641513 EYSQ5T1H1 3165 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GPR89AB7ZAQ6 455 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 H3BNX3 289 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 IFRD1O00458 451 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 FFAR3O14843 346 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 UBDO15205 165 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GPR42O15529 346 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 VPS4BO75351 444 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 SLC35G4P0C7Q5 338 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GPR89BP0CG08 455 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 UQCRBP14927 111 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 HNRNPA2B1P22626 353 aaKnown RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 ME2P23368 584 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 AKT2P31751 481 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TRIM23P36406 574 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 HALP42357 657 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 NUDT2P50583 147 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 STX1BP61266 288 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 TRAP1Q12931 704 aaKnown RBP8.61□□□□□ -1.03
PHGDH-219ENST00000641513 GRIK2Q13002 908 aa8.61□□□□□ -1.03
PHGDH-219ENST00000641513 NAE1Q13564 534 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms