RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	ZNF480	Q8WV37	535 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	GAB3	Q8WWW8	586 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	RILP	Q96NA2	401 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	INTS7	Q9NVH2	962 aa	Known RBP	11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	SPATA7	Q9P0W8	599 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	TBC1D29	Q9UFV1	150 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	ZNF225	Q9UK10	706 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	SLC22A14	Q9Y267	594 aa		11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	TDRKH	Q9Y2W6	561 aa	Known RBP	11.43	□□□□□ -0.58
CLN6-223	ENST00000637823	CFAP20	Q9Y6A4	193 aa	Known RBP	11.43	□□□□□ -0.58
CLN6-223	ENST00000637823		A0A0C4DFX4	3053 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	KRT87P	A6NCN2	255 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CCT8L1P	A6NM43	557 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	PRR5-ARHGAP8	B1AHC4	643 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	VILL	O15195	856 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	BCAT2	O15382	392 aa	Predicted RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	DIAPH2	O60879	1101 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	OR4F21	O95013	312 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CLDN9	O95484	217 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CHEK2	O96017	543 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CSF2	P04141	144 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	ERG	P11308	486 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	MTHFD1	P11586	935 aa	Known RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	HGF	P14210	728 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	JUND	P17535	347 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	ITPKA	P23677	461 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	PRDX3	P30048	256 aa	Known RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	BTK	Q06187	659 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	TRAF3	Q13114	568 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	PRKG2	Q13237	762 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CYP2A13	Q16696	494 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	SLC9B1	Q4ZJI4	515 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	METTL21C	Q5VZV1	264 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CLEC6A	Q6EIG7	209 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	FOXR1	Q6PIV2	292 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	SLC30A9	Q6PML9	568 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	ACAD11	Q709F0	780 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	BMP8A	Q7Z5Y6	402 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	SYTL1	Q8IYJ3	562 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	RAB42	Q8N4Z0	105 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	OR4F6	Q8NGB9	312 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	OR52B6	Q8NGF0	335 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	MAPK15	Q8TD08	544 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	PYCR2	Q96C36	320 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	MED8	Q96G25	268 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	LRRC37B	Q96QE4	947 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CCT7	Q99832	543 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	EBF4	Q9BQW3	602 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CCDC28B	Q9BUN5	200 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	SGPP1	Q9BX95	441 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	RAB11FIP5	Q9BXF6	653 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	NUF2	Q9BZD4	464 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	MEAF6	Q9HAF1	191 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	IMP3	Q9NV31	184 aa	Known RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	GPRC5B	Q9NZH0	403 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	CIDEB	Q9UHD4	219 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	KLF15	Q9UIH9	416 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	FIS1	Q9Y3D6	152 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	DNAJC15	Q9Y5T4	150 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	HEATR5B	Q9P2D3	2071 aa		11.42	□□□□□ -0.58
CLN6-223	ENST00000637823	TMEM131	Q92545	1883 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823		A0A1B0GTL3	188 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823		A6NCN8	305 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	OR5K4	A6NMS3	321 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823		E7ENX8	843 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	SDHD	O14521	159 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	CLGN	O14967	610 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	UGDH	O60701	494 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	CCDC22	O60826	627 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	VPS4B	O75351	444 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	F3	P13726	295 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	SLC2A4	P14672	509 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	NME1	P15531	152 aa	Known RBP	11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	EPOR	P19235	508 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	SERPINB3	P29508	390 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	CNR2	P34972	360 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	ARL1	P40616	181 aa	Predicted RBP	11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	CASP2	P42575	452 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	DHPS	P49366	369 aa	Predicted RBP	11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	AFF3	P51826	1226 aa	Known RBP	11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	INHBC	P55103	352 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	C21orf59	P57076	290 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	NXPH1	P58417	271 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	TAP2	Q03519	686 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	IFT88	Q13099	833 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	TUBB3	Q13509	450 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	TEAD4	Q15561	434 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	PDCD2	Q16342	344 aa	Predicted RBP	11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	ZNF542P	Q5EBM4	170 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	VWA5B1	Q5TIE3	1220 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	LIPJ	Q5W064	366 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	LYSMD4	Q5XG99	296 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	PMS2CL	Q68D20	193 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	LETMD1	Q6P1Q0	360 aa		11.41	□□□□□ -0.58
CLN6-223	ENST00000637823	IYD	Q6PHW0	289 aa		11.41	□□□□□ -0.58

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