RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 DMPKQ09013 629 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 FRG1Q14331 258 aaKnown RBP12.29□□□□□ -0.44
CTSD-208ENST00000636843 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 LDLRAP1Q5SW96 308 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 KCTD11Q693B1 232 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 CASC4Q6P4E1 433 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 SH2D5Q6ZV89 423 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 SPATA21Q7Z572 469 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 KLHDC8BQ8IXV7 354 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 SIDT2Q8NBJ9 832 aaKnown RBP12.29□□□□□ -0.44
CTSD-208ENST00000636843 TCP10LQ8TDR4 215 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 SLC41A2Q96JW4 573 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 TWSG1Q9GZX9 223 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 VPS11Q9H270 941 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 LRRC40Q9H9A6 602 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 IL26Q9NPH9 171 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 LHX9Q9NQ69 397 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 CASS4Q9NQ75 786 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 BFARQ9NZS9 450 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 HACD3Q9P035 362 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 RARRES3Q9UL19 164 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 WDR37Q9Y2I8 494 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
CTSD-208ENST00000636843 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 MAGEB16A2A368 324 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 PIPSLA2A3N6 862 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 CDC14CA4D256 554 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 POP7O75817 140 aaKnown RBP12.28□□□□□ -0.44
CTSD-208ENST00000636843 PIAS1O75925 651 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 NTRK1P04629 796 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 POLBP06746 335 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 FURINP09958 794 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 SPAM1P38567 509 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 CCNFP41002 786 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 WNT3AP56704 352 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 SESN2P58004 480 aaPredicted RBP12.28□□□□□ -0.44
CTSD-208ENST00000636843 ACY1Q03154 408 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 RPE65Q16518 533 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 KDELC1Q6UW63 502 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 TIFABQ6ZNK6 161 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 ASB18Q6ZVZ8 466 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 LINC00523Q86TU6 105 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 KMT5CQ86Y97 462 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 APLFQ8IW19 511 aaPredicted RBP12.28□□□□□ -0.44
CTSD-208ENST00000636843 TTC30BQ8N4P2 665 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 CCT6BQ92526 530 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 MIB2Q96AX9 1013 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 RNF31Q96EP0 1072 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 OXNAD1Q96HP4 312 aaPredicted RBP12.28□□□□□ -0.44
CTSD-208ENST00000636843 CD180Q99467 661 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 IL17CQ9P0M4 197 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 ARL2BPQ9Y2Y0 163 aa12.28□□□□□ -0.44
CTSD-208ENST00000636843 AAR2Q9Y312 384 aaKnown RBP12.28□□□□□ -0.44
CTSD-208ENST00000636843 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 F5H423 210 aaPredicted RBP12.27□□□□□ -0.44
CTSD-208ENST00000636843 COPEO14579 308 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 DHRS4L1P0CG22 281 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 PYGBP11216 843 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 GP1BBP13224 206 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 FOLR1P15328 257 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 NFKB1P19838 968 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 CD68P34810 354 aaPredicted RBP12.27□□□□□ -0.44
CTSD-208ENST00000636843 CD97P48960 835 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 TUBB3Q13509 450 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 CRYMQ14894 314 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 TRMT10BQ6PF06 316 aaKnown RBP12.27□□□□□ -0.44
CTSD-208ENST00000636843 ATCAYQ86WG3 371 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 FAM26EQ8N5C1 309 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 DDHD1Q8NEL9 900 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 CT55Q8WUE5 264 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 GORASP1Q9BQQ3 440 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 GPR87Q9BY21 358 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.44
CTSD-208ENST00000636843 SYBUQ9NX95 663 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 TLK1Q9UKI8 766 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 MAN2B2Q9Y2E5 1009 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 PKP3Q9Y446 797 aa12.27□□□□□ -0.44
CTSD-208ENST00000636843 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 KLHL33A6NCF5 533 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 TLCD2A6NGC4 264 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 GOLGA8RI6L899 631 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 EDF1O60869 148 aaKnown RBP12.27□□□□□ -0.45
CTSD-208ENST00000636843 ANXA9O76027 345 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 USP1O94782 785 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 GSTA1P08263 222 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 HLA-DPA1P20036 260 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 ADRA1DP25100 572 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 ARL4DP49703 201 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 CTSCP53634 463 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 MGAT5Q09328 741 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 ITGA9Q13797 1035 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 PLCL1Q15111 1095 aa12.27□□□□□ -0.45
CTSD-208ENST00000636843 ZKSCAN8Q15776 578 aaPredicted RBP12.27□□□□□ -0.45
CTSD-208ENST00000636843 CHRNA6Q15825 494 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms