RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DOCK4Q8N1I0 1966 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 A8MU76 341 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 CENPBD1B2RD01 187 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 M0QZ92 97 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 GPR182O15218 404 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 PCSK2P16519 638 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 MC4RP32245 332 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 ACVRL1P37023 503 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 NEK2P51955 445 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 DDR2Q16832 855 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 ZNF772Q68DY9 489 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 DESI1Q6ICB0 168 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 PSAPL1Q6NUJ1 521 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 CEP68Q76N32 757 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 SCN4BQ8IWT1 228 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 ATL1Q8WXF7 558 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 PDFQ9HBH1 243 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 ZBTB20Q9HC78 741 aaPredicted RBP14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 SARS2Q9NP81 518 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 KRT84Q9NSB2 600 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 RAPGEFL1Q9UHV5 662 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 MKLN1Q9UL63 735 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 RNF6Q9Y252 685 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 DHRS7Q9Y394 339 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 ANGPTL3Q9Y5C1 460 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 PEX16Q9Y5Y5 336 aa14.47□□□□□ -0.09
CACNA1A-220ENST00000635988 MYO1GB0I1T2 1018 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 ARVCFO00192 962 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 FFAR2O15552 330 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 OR1I1O60431 355 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 ULK1O75385 1050 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 BMPR1AP36894 532 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 CDKN1CP49918 316 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 FPGSQ05932 587 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 TBCEQ15813 527 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 SMN1Q16637 294 aaKnown RBP14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 TTLL9Q3SXZ7 439 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 GTDC1Q4AE62 458 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 PAN2Q504Q3 1202 aaKnown RBP14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 P3H2Q8IVL5 708 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 PIANPQ8IYJ0 282 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 MDGA1Q8NFP4 955 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 LILRB4Q8NHJ6 448 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 CLSTN3Q9BQT9 956 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 AASSQ9UDR5 926 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 RPS6KA6Q9UK32 745 aa14.46□□□□□ -0.09
CACNA1A-220ENST00000635988 CA12O43570 354 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 ARHGEF15O94989 841 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 ZNF682O95780 498 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 GLUD1P00367 558 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 FABP3P05413 133 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 S100A3P33764 101 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 NR4A2P43354 598 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 CARTPTQ16568 116 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 RSBN1Q5VWQ0 802 aaPredicted RBP14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 CCBE1Q6UXH8 406 aaPredicted RBP14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 PGBD3Q8N328 593 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 CLIP4Q8N3C7 705 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 METTL4Q8N3J2 472 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 MYDGFQ969H8 173 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 IL37Q9NZH6 218 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 PDP1Q9P0J1 537 aaPredicted RBP14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 ST3GAL5Q9UNP4 418 aa14.46□□□□□ -0.1
CACNA1A-220ENST00000635988 CCNKO75909 580 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PGLSO95336 258 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 RPLP0P05388 317 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 TYMPP19971 482 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 HOXA9P31269 272 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 LIPAP38571 399 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 CLCN7P51798 805 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 COPZ1P61923 177 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 CACNB2Q08289 660 aaPredicted RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 EFEMP1Q12805 493 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 FBXO43Q4G163 708 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ZRANB3Q5FWF4 1079 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 AGAP6Q5VW22 663 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 SBSNQ6UWP8 590 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PARP16Q8N5Y8 322 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 KRTCAP2Q8N6L1 136 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ATG16L2Q8NAA4 619 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PYCR2Q96C36 320 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 AGAP4Q96P64 663 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 BARD1Q99728 777 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 RHNO1Q9BSD3 238 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 COPS4Q9BT78 406 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 KATNAL1Q9BW62 490 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ZFP14Q9HCL3 533 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 TRPS1Q9UHF7 1281 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ABCG2Q9UNQ0 655 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHB1Q9Y5F3 818 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 IDH3BO43837 385 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 WBP4O75554 376 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ALOX12P18054 663 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 NPRL3Q12980 569 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 SYT16Q17RD7 645 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 TIGD6Q17RP2 521 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 USP39Q53GS9 565 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 MLIPQ5VWP3 458 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms