RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZBTB5O15062 677 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 LINC01565O15544 149 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MBTPS2O43462 519 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TLX3O43711 291 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TBCAO75347 108 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 AVILO75366 819 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 STAM2O75886 525 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 CLDN7O95471 211 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 GGPS1O95749 300 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 AFPP02771 609 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HIST1H2ABP04908 130 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TPOP07202 933 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 RSPH10BP0C881 870 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TFPIP10646 304 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HIST1H2ADP20671 130 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 CASTP20810 708 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MYF6P23409 242 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HOXA11P31270 313 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF41P51814 821 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HAND2P61296 217 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MRPS34P82930 218 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SORDQ00796 357 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 NAE1Q13564 534 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 CAPSQ13938 189 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 STXBP2Q15833 593 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 C2orf68Q2NKX9 166 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SMTNL2Q2TAL5 461 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 USH1GQ495M9 461 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 DCAF6Q58WW2 860 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 C6orf10Q5SRN2 563 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 LRIF1Q5T3J3 769 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ASPHD1Q5U4P2 390 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 KRT80Q6KB66 452 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HEPHL1Q6MZM0 1159 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM71Q6P5X7 295 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TRILQ7L0X0 811 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HIST3H2AQ7L7L0 130 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 PLPPR4Q7Z2D5 763 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ADGRD2Q7Z7M1 963 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 RBM23Q86U06 439 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 HAPLN4Q86UW8 402 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 CAMK1DQ8IU85 385 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SFTPA2Q8IWL1 248 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM217AQ8IXS0 508 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 OR14L1PQ8NHC6 308 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 CEP76Q8TAP6 659 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM163Q8TC26 289 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TRPC4APQ8TEL6 797 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ATP8B4Q8TF62 1192 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ESR2Q92731 530 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 APBB2Q92870 758 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 P2RX5Q93086 422 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 IGSF8Q969P0 613 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM18Q96B42 140 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MOAP1Q96BY2 351 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 RRNAD1Q96FB5 475 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SPATA17Q96L03 361 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 PCYT2Q99447 389 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 PAFAH2Q99487 392 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ADPGKQ9BRR6 497 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MSTO1Q9BUK6 570 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SPZ1Q9BXG8 430 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 LHPPQ9H008 270 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 RSPH9Q9H1X1 276 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 DENND2DQ9H6A0 471 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TASP1Q9H6P5 420 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 AAMDCQ9H7C9 122 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 DECR2Q9NUI1 292 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 COPG2Q9UBF2 871 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 UBA2Q9UBT2 640 aaPredicted RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MTUS1Q9ULD2 1270 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 PLAGL1Q9UM63 463 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 PPIEQ9UNP9 301 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 ERVK-11Q9UQG0 969 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 TRPV2Q9Y5S1 764 aa2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 SETXQ7Z333 2677 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 GCN1Q92616 2671 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 MAP1BP46821 2468 aaKnown RBP2.46□□□□□ -2.02
SMARCB1-208ENST00000634926 KIF26AQ9ULI4 1882 aaPredicted RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 NRCAMQ92823 1304 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IGSF9BQ9UPX0 1349 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 TENM4Q6N022 2769 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 MYH9P35579 1960 aaKnown RBP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IGSF10Q6WRI0 2623 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CACNA1BQ00975 2339 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 LOC102723996A0A087X1L8 192 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 A0A0G2JK05 382 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 IGLV5-39A0A0G2JS06 123 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GSTTP1A0A1W2PQM5 241 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GAGE12JA6NER3 117 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 STMND1H3BQB6 276 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 OGG1O15527 345 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ATP9AO75110 1047 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ZC3H11AO75152 810 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 GPC4O75487 556 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 RGS11O94810 467 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 NDUFB4O95168 129 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 CGAP01215 116 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 KLKB1P03952 638 aa2.45□□□□□ -2.02
SMARCB1-208ENST00000634926 ABCB1P08183 1280 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms