RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 FAM120BQ96EK7 910 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 NRBF2Q96F24 287 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 CMTM7Q96FZ5 175 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ITCHQ96J02 903 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RBM4BQ9BQ04 359 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 RBM4Q9BWF3 364 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 KCNH6Q9H252 994 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TNKS2Q9H2K2 1166 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PARVBQ9HBI1 364 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 HPS4Q9NQG7 708 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 ARL15Q9NXU5 204 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC25A37Q9NYZ2 338 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SPG21Q9NZD8 308 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 CFAP97Q9P2B7 532 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PPIL1Q9Y3C6 166 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 IGLV3-16A0A075B6K0 115 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TRBV5-3A0A0A0MS03 114 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 A0A1W2PQ67 120 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 C16orf96A6NNT2 1141 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 NPIPB8E9PQR5 432 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 H0Y858 1186 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 GNGT2O14610 69 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SLC16A5O15375 505 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 NUAK1O60285 661 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ZNF821O75541 412 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 CPNE6O95741 557 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CST1P01037 141 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CKMP06732 381 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HIST1H2AGP0C0S8 130 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 PCNAP12004 261 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ACPPP15309 386 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 LAG3P18627 525 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HIST1H2ADP20671 130 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 AOAHP28039 575 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 GABRR2P28476 465 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 GKP32189 559 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 RPIAP49247 311 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HNMTP50135 292 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TPD52P55327 224 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 CLDN8P56748 225 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HTRA3P83110 453 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CREMQ03060 361 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
GPC3-204ENST00000631057 PMS2P3Q13401 168 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TUBA3CQ13748 450 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 BOP1Q14137 746 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 PLCL1Q15111 1095 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 OCLNQ16625 522 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 AAK1Q2M2I8 961 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 RFX4Q33E94 735 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 DGKKQ5KSL6 1271 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 LRIF1Q5T3J3 769 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 LRRC66Q68CR7 880 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CNKSR3Q6P9H4 555 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SUSD1Q6UWL2 747 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ENPP6Q6UWR7 440 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 MBOAT1Q6ZNC8 495 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 GCNT7Q6ZNI0 430 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 DDX53Q86TM3 631 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 TSPAN33Q86UF1 283 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ZSWIM9Q86XI8 627 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CALHM3Q86XJ0 350 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 BBS7Q8IWZ6 715 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 MSRB3Q8IXL7 192 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 EID3Q8N140 333 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ZCCHC7Q8N3Z6 543 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 GPR26Q8NDV2 337 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ZNF555Q8NEP9 628 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 PJA1Q8NG27 643 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 OR5K1Q8NHB7 308 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SELENOMQ8WWX9 145 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HDAC2Q92769 488 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 NCLNQ969V3 563 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ECHDC3Q96DC8 303 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SCRN2Q96FV2 425 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 MAGED4Q96JG8 741 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 HIST1H2AHQ96KK5 128 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 MUS81Q96NY9 551 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 MCCC1Q96RQ3 725 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 HIST1H2AJQ99878 128 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CPPED1Q9BRF8 314 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 H2AFJQ9BTM1 129 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 OSBPL10Q9BXB5 764 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SLC12A9Q9BXP2 914 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 CPEB1Q9BZB8 566 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 ACPTQ9BZG2 426 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 TGIF2Q9GZN2 237 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 PAIP1Q9H074 479 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 TOR3AQ9H497 397 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SUV39H2Q9H5I1 410 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 ELOVL6Q9H5J4 265 aa7.87□□□□□ -1.15
GPC3-204ENST00000631057 SOX17Q9H6I2 414 aaPredicted RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 KAT8Q9H7Z6 458 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 LIN28AQ9H9Z2 209 aaKnown RBP7.87□□□□□ -1.15
GPC3-204ENST00000631057 PLGRKTQ9HBL7 147 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms