RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CCNDBP1O95273 360 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 ENO2P09104 434 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 UGT2B7P16662 529 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 FDXRP22570 491 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 MCM3P25205 808 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 GABRB3P28472 473 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 OAS2P29728 719 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 SSTR1P30872 391 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 TMPRSS3P57727 454 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 POU4F1Q01851 419 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 SLMAPQ14BN4 828 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 CYP2A13Q16696 494 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 HECTD2Q5U5R9 776 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 RASGRP3Q8IV61 690 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 CPNE9Q8IYJ1 553 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 NKAPQ8N5F7 415 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 ESX1Q8N693 406 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 EIF1ADQ8N9N8 165 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 KIAA1143Q96AT1 154 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 FAM136AQ96C01 138 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 PDLIM5Q96HC4 596 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 NDNQ99608 321 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 MENTQ9BUN1 341 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 SERTAD3Q9UJW9 196 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 B3GALT1Q9Y5Z6 326 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 FAM95CA0A1B0GW59 222 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ESYT3A0FGR9 886 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC9B1P1A6NJY1 282 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 KLK10O43240 276 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 HBQ1P09105 142 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ERGP11308 486 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 CCND1P24385 295 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 SPRP35270 261 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 AP1S2P56377 157 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 PPP1CAP62136 330 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 GRB7Q14451 532 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ZC3H12BQ5HYM0 836 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 DTX1Q86Y01 620 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 SPACA3Q8IXA5 215 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 NLGN4XQ8N0W4 816 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 NLGN4YQ8NFZ3 816 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 GIMAP7Q8NHV1 300 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ATL1Q8WXF7 558 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ELMO2Q96JJ3 720 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 OR2A14Q96R47 310 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 CYTH2Q99418 400 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC12A9Q9BXP2 914 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ULBP3Q9BZM4 244 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 PCBD2Q9H0N5 130 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 L2HGDHQ9H9P8 463 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 ANKMY1Q9P2S6 941 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
SNRPA1-216ENST00000626000 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.24
SNRPA1-216ENST00000626000 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ARHGEF33A8MVX0 844 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 STK17BO94768 372 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CMPK1P30085 196 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 BDKRB1P46663 353 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 TLE3Q04726 772 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CLN3Q13286 438 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 SF1Q15637 639 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 MANEAQ5SRI9 462 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 PAQR3Q6TCH7 311 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CAPN12Q6ZSI9 719 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 UBE2R2Q712K3 238 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 TAOK1Q7L7X3 1001 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CTAGE3PQ8IX95 158 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 GPR135Q8IZ08 494 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 IL22RA1Q8N6P7 574 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ZSCAN1Q8NBB4 408 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 IFT81Q8WYA0 676 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 LINGO1Q96FE5 620 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 CCNL2Q96S94 520 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 RBBP8Q99708 897 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 PARVBQ9HBI1 364 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.25
SNRPA1-216ENST00000626000 GALPQ9UBC7 116 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms