RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	BDH1	Q02338	343 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	GANAB	Q14697	944 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	CARD16	Q5EG05	197 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	YIPF7	Q8N8F6	280 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	GLIS3	Q8NEA6	775 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PWWP2A	Q96N64	755 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ACBD6	Q9BR61	282 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	SLC5A7	Q9GZV3	580 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PRKCG	P05129	697 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	EDNRA	P25101	427 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	HTR7	P34969	479 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	C3orf33	Q6P1S2	294 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	OR2L2	Q8NH16	312 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ANGPTL1	O95841	491 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	NR2C1	P13056	603 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	NDST2	P52849	883 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	S100A10	P60903	97 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PRKD1	Q15139	912 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	AAK1	Q2M2I8	961 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	REP15	Q6BDI9	236 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	GDPD4	Q6W3E5	623 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	AVL9	Q8NBF6	648 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	JOSD2	Q8TAC2	188 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	C2orf15	Q8WU43	125 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	THEM6	Q8WUY1	208 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	KCNJ9	Q92806	393 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	MKL1	Q969V6	931 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	FADS3	Q9Y5Q0	445 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	LDB2	O43679	373 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	COQ9	O75208	318 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	UGT1A3	P35503	534 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	NR0B1	P51843	470 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PLP2	Q04941	152 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	AUH	Q13825	339 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ZNF792	Q3KQV3	632 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PTF1A	Q7RTS3	328 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	CPNE9	Q8IYJ1	553 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	SPATA22	Q8NHS9	363 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ORAI3	Q9BRQ5	295 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	FKBPL	Q9UIM3	349 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	C14orf166	Q9Y224	244 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ZC3H13	Q5T200	1668 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	DUXA	A6NLW8	204 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	MAN2A2	P49641	1150 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	CSTF1	Q05048	431 aa	Known RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	TAF1A	Q15573	450 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ALG10B	Q5I7T1	473 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	TMPPE	Q6ZT21	453 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	SLC9B2	Q86UD5	537 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PSMG2	Q969U7	264 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	LHX5	Q9H2C1	402 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	VNN3	Q9NY84	501 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	BAIAP2	Q9UQB8	552 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	PCDHA2	Q9Y5H9	948 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	MEIS2	O14770	477 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	TGDS	O95455	350 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	MT-ND1	P03886	318 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	CHRM5	P08912	532 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ZBTB48	P10074	688 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	ACSL1	P33121	698 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	DDR1	Q08345	913 aa		13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	LNX1	Q8TBB1	728 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.6	□□□□□ -0.23
NRXN1-222	ENST00000625672	SCGB2A1	O75556	95 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	ITGA10	O75578	1167 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	CPNE6	O95741	557 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	SLC1A2	P43004	574 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	MARCKSL1	P49006	195 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	IFI44L	Q53G44	452 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	SLC30A8	Q8IWU4	369 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	JAGN1	Q8N5M9	183 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	DQX1	Q8TE96	717 aa	Known RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	SCGB3A2	Q96PL1	93 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	KCNS2	Q9ULS6	477 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	NCAN	O14594	1321 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	IRS2	Q9Y4H2	1338 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	AZGP1	P25311	298 aa	Known RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	NRL	P54845	237 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	GPAT4	Q86UL3	456 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	OR10A6	Q8NH74	314 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	ACD	Q96AP0	544 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	CNDP2	Q96KP4	475 aa	Known RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	NIFK	Q9BYG3	293 aa	Known RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	SLC25A51	Q9H1U9	297 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	LRRC19	Q9H756	370 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	KIF20B	Q96Q89	1820 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	ERCC1	P07992	297 aa	Predicted RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	HOXB2	P14652	356 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	ELF3	P78545	371 aa	Predicted RBP	13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	GRIK2	Q13002	908 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	DECR1	Q16698	335 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	TYSND1	Q2T9J0	566 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	KLHL22	Q53GT1	634 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	AGAP2	Q99490	1192 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	TMEM168	Q9H0V1	697 aa		13.59	□□□□□ -0.23
NRXN1-222	ENST00000625672	MALT1	Q9UDY8	824 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms