RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 SLC22A11Q9NSA0 550 aa18.24■□□□□ 0.51
SMN1-211ENST00000625245 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.24■□□□□ 0.51
SMN1-211ENST00000625245 CDC23Q9UJX2 597 aa18.24■□□□□ 0.51
SMN1-211ENST00000625245 DIDO1Q9BTC0 2240 aaKnown RBP18.24■□□□□ 0.51
SMN1-211ENST00000625245 DOPEY1Q5JWR5 2465 aa18.24■□□□□ 0.51
SMN1-211ENST00000625245 PCM1Q15154 2024 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 CENPEQ02224 2701 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 DCTP40126 519 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 GDF10P55107 478 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 SOX8P57073 446 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 AIMP2Q13155 320 aaKnown RBP18.23■□□□□ 0.51
SMN1-211ENST00000625245 HIF1AQ16665 826 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 Q6ZS92 163 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 LINC00523Q86TU6 105 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 TAX1BP1Q86VP1 789 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 DNAAF3Q8N9W5 541 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 OR52K1Q8NGK4 314 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 TTC1Q99614 292 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 TMEM121Q9BTD3 319 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 SLC6A20Q9NP91 592 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 AGPAT4Q9NRZ5 378 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 FBXL4Q9UKA2 621 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 AMFRQ9UKV5 643 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 NTNG1Q9Y2I2 539 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 PCDHGA10Q9Y5H3 936 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 ITPR2Q14571 2701 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 SVILO95425 2214 aa18.23■□□□□ 0.51
SMN1-211ENST00000625245 ZGRF1Q86YA3 2104 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 F8W8V4 182 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 GAS8O95995 478 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 PIM1P11309 404 aaPredicted RBP18.22■□□□□ 0.51
SMN1-211ENST00000625245 PKLRP30613 574 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 GRIA3P42263 894 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 RAB28P51157 221 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 ARSFP54793 590 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 HSPA14Q0VDF9 509 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
SMN1-211ENST00000625245 CRB2Q5IJ48 1285 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 IRAK1BP1Q5VVH5 260 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 SHISA6Q6ZSJ9 500 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 WDR77Q9BQA1 342 aaPredicted RBP18.22■□□□□ 0.51
SMN1-211ENST00000625245 SLC2A6Q9UGQ3 507 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 R3HDM2Q9Y2K5 976 aaKnown RBP18.22■□□□□ 0.51
SMN1-211ENST00000625245 CSAG2Q9Y5P2 127 aa18.22■□□□□ 0.51
SMN1-211ENST00000625245 A0A1B0GX78 115 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 GRID2IPA4D2P6 1211 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 GOT2P00505 430 aaKnown RBP18.21■□□□□ 0.51
SMN1-211ENST00000625245 MMP11P24347 488 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 MCM3P25205 808 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 PSMA3P25788 255 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 CCR7P32248 378 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 PRAMEF13Q5VWM6 474 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 OVCH1Q7RTY7 1134 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 PEX26Q7Z412 305 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 VRK3Q8IV63 474 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 PARP9Q8IXQ6 854 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 SLC22A15Q8IZD6 547 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 UBL4BQ8N7F7 174 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 LINC01555Q8NAE3 123 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 OR6P1Q8NGX9 317 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 DENND1AQ8TEH3 1009 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 UBE2Q2Q8WVN8 375 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.21■□□□□ 0.51
SMN1-211ENST00000625245 IL17FQ96PD4 163 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 LACRTQ9GZZ8 138 aa18.21■□□□□ 0.51
SMN1-211ENST00000625245 PACSIN2Q9UNF0 486 aaPredicted RBP18.21■□□□□ 0.51
SMN1-211ENST00000625245 POLEQ07864 2286 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 RPN2P04844 631 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 ITGAXP20702 1163 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 CD9P21926 228 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 CDH17Q12864 832 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 SF1Q15637 639 aaKnown RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 AGAP7PQ5VUJ5 663 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 FIGLAQ6QHK4 219 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 AFTPHQ6ULP2 937 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 PPP1R21Q6ZMI0 780 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 METTL27Q8N6F8 245 aaPredicted RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 LRRC57Q8N9N7 239 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 OR13J1Q8NGT2 312 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 DNAJB14Q8TBM8 379 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 ASZ1Q8WWH4 475 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 FKBP10Q96AY3 582 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 SLC22A18Q96BI1 424 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 AGAP4Q96P64 663 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 TSSK1BQ9BXA7 367 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 CUTCQ9NTM9 273 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 INTS7Q9NVH2 962 aaKnown RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 SLC39A10Q9ULF5 831 aa18.2■□□□□ 0.5
SMN1-211ENST00000625245 NOVA2Q9UNW9 492 aaKnown RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
SMN1-211ENST00000625245 TCRBV7S2A1N4TA0A589 114 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 HEATR9A2RTY3 570 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 ENO4A6NNW6 628 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 IQCF5A8MTL0 148 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 BTNL10A8MVZ5 291 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 DSCR3O14972 297 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 ALBP02768 609 aa18.19■□□□□ 0.5
SMN1-211ENST00000625245 OR1D4P47884 311 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms