RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 LIMK2P53671 638 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 BCAT1P54687 386 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SNRPD2P62316 118 aaKnown RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ADIGQ0VDE8 80 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 KCNAB2Q13303 367 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 BTN1A1Q13410 526 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CAMK1Q14012 370 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 PRPSAP1Q14558 356 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TTLL4Q14679 1199 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 KCTD2Q14681 263 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ZNF169Q14929 603 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 QPRTQ15274 297 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ZBTB6Q15916 424 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 HSD17B12Q53GQ0 312 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ZC3H12BQ5HYM0 836 aaKnown RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 C9orf57Q5W0N0 161 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 RAP1GAP2Q684P5 730 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 FSTL4Q6MZW2 842 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 LAYNQ6UX15 382 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ARMCX2Q7L311 632 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 OVCH2Q7RTZ1 564 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CTU1Q7Z7A3 348 aaKnown RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 STRA8Q7Z7C7 330 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 PROSER1Q86XN7 944 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ZDHHC17Q8IUH5 632 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 RIMKLAQ8IXN7 391 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 NPWQ8N729 165 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ATOH1Q92858 354 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TMBIM1Q969X1 311 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 PDLIM5Q96HC4 596 aaKnown RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 RBBP8Q99708 897 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 APOL2Q9BQE5 337 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 C16orf70Q9BSU1 422 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 MLPHQ9BV36 600 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ACE2Q9BYF1 805 aaPredicted RBP7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SHARPINQ9H0F6 387 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TMEM245Q9H330 911 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 CDHR5Q9HBB8 845 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 C3orf14Q9HBI5 128 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 LRRC4Q9HBW1 653 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SDHAF3Q9NRP4 125 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TINAGQ9UJW2 476 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 LIPT1Q9Y234 373 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 SESN1Q9Y6P5 492 aa7.34□□□□□ -1.23
TRIM49B-202ENST00000622138 TSC2P49815 1807 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 PDCD11Q14690 1871 aaKnown RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 LOC100130705A0A1B0GUX0 176 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 FAM92AA1XBS5 289 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SH3D21A4FU49 640 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 MROH6A6NGR9 719 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 B4DXG7 233 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 DCLK1O15075 740 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 HRO43593 1189 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 RHOBTB1O94844 696 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 LRIG2O94898 1065 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 PAPSS2O95340 614 aaPredicted RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 IFNA7P01567 189 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 RPLP0P05388 317 aaKnown RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 TPOP07202 933 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SBK3P0C264 359 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 ALAS2P22557 587 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 AKAP5P24588 427 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 PTPN3P26045 913 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 MATKP42679 507 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 GLUD2P49448 558 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 MAP2K6P52564 334 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SOX4Q06945 474 aaPredicted RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SCN1BQ07699 218 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 PCDH1Q08174 1060 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 HYAL2Q12891 473 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 CDK5R2Q13319 367 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 IRF5Q13568 498 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 DGCR6Q14129 220 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 TRIP4Q15650 581 aaPredicted RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 DUSP6Q16828 381 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 RUNDC3AQ59EK9 446 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 PITRM1Q5JRX3 1037 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 CERCAMQ5T4B2 595 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SYPL2Q5VXT5 272 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 FAM219BQ5XKK7 198 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 GPR139Q6DWJ6 353 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF470Q6ECI4 717 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 TAPT1Q6NXT6 567 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 RRM2BQ7LG56 351 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 KRT77Q7Z794 578 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 STK32CQ86UX6 486 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF557Q8N988 423 aaPredicted RBP7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
TRIM49B-202ENST00000622138 SPPL2BQ8TCT7 592 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms