RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CEP57Q86XR8 500 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CFAP206Q8IYR0 622 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 LYG1Q8N1E2 194 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 ARHGAP24Q8N264 748 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 PAPD5Q8NDF8 572 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 MOSPD2Q8NHP6 518 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 ZNRF4Q8WWF5 429 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TBC1D31Q96DN5 1066 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 SPAG5Q96R06 1193 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM51Q9BSJ1 452 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 LMF2Q9BU23 707 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CLEC7AQ9BXN2 247 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TBC1D17Q9HA65 648 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 ARHGEF38Q9NXL2 777 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 LRWD1Q9UFC0 647 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF215Q9UL58 517 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 GPRASP1Q5JY77 1395 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CTDSP2O14595 271 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 MED24O75448 989 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 TPM2P07951 284 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 VPREB1P12018 145 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 NAP1L1P55209 391 aaKnown RBP3.75□□□□□ -1.81
BRCA1-229ENST00000621897 BPIFB3P59826 476 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 SIRPAP78324 504 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 PSMD6Q15008 389 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ITPRIPL2Q3MIP1 535 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 DUSP28Q4G0W2 176 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 RILPL1Q5EBL4 403 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 XKR3Q5GH77 459 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 SLC25A53Q5H9E4 307 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 SPDYCQ5MJ68 293 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ITPRIPL1Q6GPH6 555 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 TMPRSS11FQ6ZWK6 438 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 SZRD1Q7Z422 152 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ADIPOR2Q86V24 386 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 KBTBD6Q86V97 674 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 RAB42Q8N4Z0 105 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ARL10Q8N8L6 244 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 PPFIBP2Q8ND30 876 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 OR5AP2Q8NGF4 316 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM44Q96DX7 344 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-229ENST00000621897 AGAP3Q96P47 875 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 CDRT15Q96T59 188 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 OLFM1Q99784 485 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 TREX2Q9BQ50 279 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-229ENST00000621897 FUCA2Q9BTY2 467 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 NUP85Q9BW27 656 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 DBNDD1Q9H9R9 158 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 RPS10P5Q9NQ39 176 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 NSMCE4AQ9NXX6 385 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 B3GAT1Q9P2W7 334 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 EPHA6Q9UF33 1036 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 XPO7Q9UIA9 1087 aaKnown RBP3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ANGPTL3Q9Y5C1 460 aa3.75□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF541Q9H0D2 1346 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 A0A1W2PQ09 198 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 CPLX1O14810 134 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 PI15O43692 258 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 PRAMEF11O60813 436 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 GJB3O75712 270 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 DFFBO76075 338 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 SLC6A6P31641 620 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 KIF5BP33176 963 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 DEKP35659 375 aaKnown RBP3.74□□□□□ -1.81
BRCA1-229ENST00000621897 ARSEP51690 589 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 MC1RQ01726 317 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 CREB5Q02930 508 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 DRP2Q13474 957 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 SQLEQ14534 574 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 SGSM1Q2NKQ1 1148 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 HECTD3Q5T447 861 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 Q6ZRP5 223 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 PTAR1Q7Z6K3 402 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-229ENST00000621897 ERC1Q8IUD2 1116 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 LSMEM2Q8N112 164 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 MARVELD2Q8N4S9 558 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 NPEPL1Q8NDH3 523 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 OR11H4Q8NGC9 324 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 OR8H1Q8NGG4 311 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 AZIN2Q96A70 460 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 CENPTQ96BT3 561 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 FAM120BQ96EK7 910 aaKnown RBP3.74□□□□□ -1.81
BRCA1-229ENST00000621897 NEK1Q96PY6 1258 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 SYNCQ9H7C4 482 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 ERAP1Q9NZ08 941 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 CACNG4Q9UBN1 327 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 GIMAP2Q9UG22 337 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 DAPK2Q9UIK4 370 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 PA2G4Q9UQ80 394 aaKnown RBP3.74□□□□□ -1.81
BRCA1-229ENST00000621897 WDR37Q9Y2I8 494 aa3.74□□□□□ -1.81
BRCA1-229ENST00000621897 MEX3AA1L020 520 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 SYNDIG1LA6NDD5 238 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 ANKUB1A6NFN9 424 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM64A6NGJ6 449 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM64BA6NI03 449 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 ADAMDEC1O15204 470 aa3.73□□□□□ -1.81
BRCA1-229ENST00000621897 HTATSF1O43719 755 aaKnown RBP3.73□□□□□ -1.81
BRCA1-229ENST00000621897 DKC1O60832 514 aaKnown RBP eCLIP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms