RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HOPXQ9BPY8 73 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 CCDC28BQ9BUN5 200 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 KIFC1Q9BW19 673 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ERVK-6Q9BXR3 956 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TDRD1Q9BXT4 1180 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 TMEM27Q9HBJ8 222 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 OR1A2Q9Y585 309 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 DGKBQ9Y6T7 804 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TUBGCP6Q96RT7 1819 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 PLCH1Q4KWH8 1693 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 A0A1W2PRB8 838 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 DYTNA2CJ06 578 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 LCHNA4D1U4 455 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ZNF860A6NHJ4 632 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 SMAD6O43541 496 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 KLK1P06870 262 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 C6P13671 934 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 CSNK2A2P19784 350 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 IMPDH1P20839 514 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 HNMTP50135 292 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 MRPS15P82914 257 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 NIPAL4Q0D2K0 466 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 SCAPQ12770 1279 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ARHGAP40Q5TG30 622 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ADGRG6Q86SQ4 1221 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TSPAN33Q86UF1 283 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 CAND1Q86VP6 1230 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 SAMD14Q8IZD0 417 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 ADCY4Q8NFM4 1077 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TTLQ8NG68 377 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 IPCEF1Q8WWN9 437 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 KCNJ9Q92806 393 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 DUSP26Q9BV47 211 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 NPHS1O60500 1241 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 SEMA4FO95754 770 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 OAS1P00973 400 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 SRCP12931 536 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 CYP4B1P13584 511 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 PRG2P13727 222 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 JAK1P23458 1154 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 PGGT1BP53609 377 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 BTN3A2P78410 334 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 LIPEQ05469 1076 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 SEMA3AQ14563 771 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 ELOCQ15369 112 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TGFBIQ15582 683 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 MBOAT1Q6ZNC8 495 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 SPPL2CQ8IUH8 684 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 IGDCC3Q8IVU1 814 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 AVL9Q8NBF6 648 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 FAM156AQ8NDB6 213 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TSACCQ96A04 125 aaPredicted RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 SLC38A2Q96QD8 506 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 RNF38Q9H0F5 515 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 RNPEPL1Q9HAU8 725 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 HEBP1Q9NRV9 189 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 TRPS1Q9UHF7 1281 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 IKZF3Q9UKT9 509 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 PRPF19Q9UMS4 504 aaKnown RBP9.03□□□□□ -0.96
GGA3-223ENST00000621870 ATRXP46100 2492 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 NHSL1Q5SYE7 1610 aa9.03□□□□□ -0.96
GGA3-223ENST00000621870 A0A0U1RQS6 177 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 TMEM233B4DJY2 109 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 PRR23D1E9PI22 279 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 TNFRSF10BO14763 440 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 PDPK1O15530 556 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 TIPRLO75663 272 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 UGT2B17O75795 530 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 UBXN7O94888 489 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 KRT8P05787 483 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 TSPAN19P0C672 248 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 PRR23D2P0DMB1 279 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 ZNF24P17028 368 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 ZNF37AP17032 561 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 TPP2P29144 1249 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 MPIP34949 423 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 PRKD1Q15139 912 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 GCNT6Q5T4J0 391 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 EMC10Q5UCC4 262 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 SLC9B2Q86UD5 537 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 C8orf59Q8N0T1 100 aaPredicted RBP9.02□□□□□ -0.96
GGA3-223ENST00000621870 PNPLA1Q8N8W4 532 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 LPGAT1Q92604 370 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 EBF4Q9BQW3 602 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 SLC17A9Q9BYT1 436 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 CXCL16Q9H2A7 254 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 ABI3Q9P2A4 366 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 MAGEL2Q9UJ55 1249 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 MYH3P11055 1940 aa9.02□□□□□ -0.96
GGA3-223ENST00000621870 MICAL3Q7RTP6 2002 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms