RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MGAT4CQ9UBM8 478 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNRF3Q9ULT6 936 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MST1RQ04912 1400 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 AGAP5A6NIR3 686 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TYMPP19971 482 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GEMP55040 296 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DDX53Q86TM3 631 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SVOPLQ8N434 492 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ACDQ96AP0 544 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 LINGO1Q96FE5 620 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 A0A1W2PQ09 198 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 A0A1W2PQL4 384 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ARVCFO00192 962 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MTRF1O75570 445 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GLUD2P49448 558 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GPR85P60893 370 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CRYZQ08257 329 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 KIAA1841Q6NSI8 718 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ESX1Q8N693 406 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 C7orf43Q8WVR3 580 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ST8SIA4Q92187 359 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 UFD1Q92890 307 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 HSH2DQ96JZ2 352 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 COA1Q9GZY4 146 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MYOZ2Q9NPC6 264 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ABI2Q9NYB9 513 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 NOCTQ9UK39 431 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 NUMBLQ9Y6R0 609 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 E7EQ34 232 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GOSR2O14653 212 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 HPGDSO60760 199 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TFP02787 698 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 C8BP07358 591 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 S100A12P80511 92 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SELENBP1Q13228 472 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 FAM189A2Q15884 450 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PTPRNQ16849 979 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SDHAF4Q5VUM1 108 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SIGIRRQ6IA17 410 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RHBDF2Q6PJF5 856 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GLT6D1Q7Z4J2 308 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM199Q8N511 208 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TLE6Q9H808 572 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 BIN3Q9NQY0 253 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DNAJB9Q9UBS3 223 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PRORSD1PA6NEY8 169 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GATBO75879 557 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CCNB2O95067 398 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF286BP0CG31 522 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ARCN1P48444 511 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PRMT2P55345 433 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 LAMTOR4Q0VGL1 99 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 B3GNT8Q7Z7M8 397 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 LRP11Q86VZ4 500 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DAW1Q8N136 415 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SLC38A2Q96QD8 506 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PKP4Q99569 1192 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MROH8Q9H579 483 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 EQTNQ9NQ60 294 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 STOX2Q9P2F5 926 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 KIAA1257Q9ULG3 409 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 PIN4Q9Y237 131 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CH25HO95992 272 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CSTF2P33240 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MAGEA3P43357 314 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 AGTR2P50052 363 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TAS2R41P59536 307 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CDK10Q15131 360 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DCUN1D3Q8IWE4 304 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF471Q9BX82 626 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 OLAHQ9NV23 265 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 KCNN3Q9UGI6 736 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GMEB2Q9UKD1 530 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TRHDEQ9UKU6 1024 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 MT-ND4P03905 459 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CLCN3P51790 818 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SKP1P63208 163 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 GRIN2CQ14957 1233 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SOWAHCQ53LP3 525 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 RC3H1Q5TC82 1133 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ALKAL2Q6UX46 152 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 CARM1Q86X55 608 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM209Q96SK2 561 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 DPAGT1Q9H3H5 408 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ZMAT5Q9UDW3 170 aaKnown RBP4.94□□□□□ -1.62
VPS13D-214ENST00000620676 SLC25A13Q9UJS0 675 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 USP22Q9UPT9 525 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 VWA7Q9Y334 891 aa4.94□□□□□ -1.62
VPS13D-214ENST00000620676 ETV4P43268 484 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 CBX5P45973 191 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 RPP38P78345 283 aaKnown RBP4.93□□□□□ -1.62
VPS13D-214ENST00000620676 C18orf63Q68DL7 685 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 C17orf107Q6ZR85 190 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 MSANTD1Q6ZTZ1 278 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 NUDT18Q6ZVK8 323 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 KCTD3Q9Y597 815 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 TEX51A0A1B0GUA7 166 aa4.93□□□□□ -1.62
VPS13D-214ENST00000620676 YDJCA8MPS7 323 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms