RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 BTN2A2Q8WVV5 523 aa21.02■□□□□ 0.95
SGMS1-210ENST00000619438 FUBP1Q96AE4 644 aaKnown RBP21.02■□□□□ 0.95
SGMS1-210ENST00000619438 PDLIM5Q96HC4 596 aaKnown RBP21.02■□□□□ 0.95
SGMS1-210ENST00000619438 BATF3Q9NR55 127 aa21.02■□□□□ 0.95
SGMS1-210ENST00000619438 UCKL1Q9NWZ5 548 aa21.02■□□□□ 0.95
SGMS1-210ENST00000619438 G3BP2Q9UN86 482 aaKnown RBP21.02■□□□□ 0.95
SGMS1-210ENST00000619438 FRYQ5TBA9 3013 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 CACNB4O00305 520 aaPredicted RBP21.01■□□□□ 0.95
SGMS1-210ENST00000619438 FFAR2O15552 330 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 PDE5AO76074 875 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 FTH1P19P0C7X4 201 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 GFAPP14136 432 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 NME1P15531 152 aaKnown RBP21.01■□□□□ 0.95
SGMS1-210ENST00000619438 CD1EP15812 388 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 ZNF30P17039 623 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 SESN3P58005 492 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 STX5Q13190 355 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 KANK2Q63ZY3 851 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 PNCKQ6P2M8 343 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 MACC1Q6ZN28 852 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 BNC2Q6ZN30 1099 aaPredicted RBP21.01■□□□□ 0.95
SGMS1-210ENST00000619438 RD3Q7Z3Z2 195 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 HPS6Q86YV9 775 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 FBXO39Q8N4B4 442 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 BAHD1Q8TBE0 780 aaPredicted RBP21.01■□□□□ 0.95
SGMS1-210ENST00000619438 CD200R1Q8TD46 325 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.01■□□□□ 0.951e-8■■■■■ 58.8
SGMS1-210ENST00000619438 C19orf60Q96EN9 201 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 CNDP2Q96KP4 475 aaKnown RBP21.01■□□□□ 0.95
SGMS1-210ENST00000619438 GPR63Q9BZJ6 419 aa21.01■□□□□ 0.95
SGMS1-210ENST00000619438 AZIN1O14977 448 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 TRIM16O95361 564 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 RPS17P08708 135 aaKnown RBP21■□□□□ 0.95
SGMS1-210ENST00000619438 ALPPL2P10696 532 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 ACADVLP49748 655 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 BLKP51451 505 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 IL2P60568 153 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 PTSQ03393 145 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 CDC16Q13042 620 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 LCP2Q13094 533 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 EIF2B5Q13144 721 aaKnown RBP21■□□□□ 0.95
SGMS1-210ENST00000619438 PIGGQ5H8A4 983 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 LYSMD3Q7Z3D4 306 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 CBARPQ8N350 705 aaPredicted RBP21■□□□□ 0.95
SGMS1-210ENST00000619438 EID2BQ96D98 161 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 DTD2Q96FN9 168 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 CAAP1Q9H8G2 361 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 BPIFA1Q9NP55 256 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 KLF15Q9UIH9 416 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 SLC30A1Q9Y6M5 507 aa21■□□□□ 0.95
SGMS1-210ENST00000619438 AKAP13Q12802 2813 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CAPN8A6NHC0 703 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SUPT3HB4E1H0 165 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 MAP3K7O43318 606 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SUPT3HO75486 399 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 GPC4O75487 556 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SIX3O95343 332 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CLDN7O95471 211 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 RPS3P23396 243 aaKnown RBP eCLIP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 NFATC4Q14934 902 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 TSNQ15631 228 aaKnown RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 ANKS6Q68DC2 871 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 KANSL1Q7Z3B3 1105 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 HID1Q8IV36 788 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 HMGCLL1Q8TB92 370 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 LMX1AQ8TE12 382 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 EXT2Q93063 718 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 MARK4Q96L34 752 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 WDR26Q9H7D7 661 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 GALPQ9UBC7 116 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SPASTQ9UBP0 616 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 APOBEC3BQ9UH17 382 aaKnown RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 BCAP29Q9UHQ4 241 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CD84Q9UIB8 345 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 IKZF3Q9UKT9 509 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 FIS1Q9Y3D6 152 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 DNAJC15Q9Y5T4 150 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 ZNF106Q9H2Y7 1883 aaKnown RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 C1orf232A0A0U1RR37 186 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 PSMD12O00232 456 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 PRMT5O14744 637 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 OR1I1O60431 355 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 NIPSNAP2O75323 286 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CTSEP14091 401 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 KELP23276 732 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CDH13P55290 713 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CLCQ05315 142 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 ART3Q13508 389 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CDKN3Q16667 212 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 PRRT3Q5FWE3 981 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 LYPLAL1Q5VWZ2 237 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 CLEC6AQ6EIG7 209 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 RAET1GQ6H3X3 334 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SLCO6A1Q86UG4 719 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 PHACTR4Q8IZ21 702 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 TSACCQ96A04 125 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 WDR92Q96MX6 357 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 SLC30A3Q99726 388 aa20.99■□□□□ 0.95
SGMS1-210ENST00000619438 MRPL1Q9BYD6 325 aaKnown RBP20.99■□□□□ 0.95
SGMS1-210ENST00000619438 WDR41Q9HAD4 459 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms