RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 ZNF648Q5T619 568 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 NEK5Q6P3R8 708 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 ANKRD46Q86W74 232 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 OR52E6Q96RD3 313 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 MCCC1Q96RQ3 725 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 BRD9Q9H8M2 597 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 C1orf109Q9NX04 203 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 HS3ST2Q9Y278 367 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 CCL16O15467 120 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 PARNO95453 639 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 LRG1P02750 347 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 GSNP06396 782 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 AOAHP28039 575 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 AKT1P31749 480 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 BOP1Q14137 746 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 CACHD1Q5VU97 1274 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 PRR23BQ6ZRT6 265 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 USP45Q70EL2 814 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 SCAMP4Q969E2 229 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 VMP1Q96GC9 406 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 INPP5KQ9BT40 448 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 SLC32A1Q9H598 525 aa16.4■□□□□ 0.22
SEMA3B-213ENST00000618865 TRIM64A6NGJ6 449 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PFDN1O60925 122 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TRMUO75648 421 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 WDR47O94967 919 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 C8AP07357 584 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 MTHFRP42898 656 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 USP51Q70EK9 711 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 BEND7Q8N7W2 519 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TCEAL4Q96EI5 215 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 P2RY13Q9BPV8 354 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 C19orf43Q9BQ61 176 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 BDH2Q9BUT1 245 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ZBP1Q9H171 429 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TMEM39AQ9NV64 488 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 FAM8A1Q9UBU6 413 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 EBF1Q9UH73 591 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ADGRE2Q9UHX3 823 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PCDHB14Q9Y5E9 798 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 MYO7AQ13402 2215 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 KCNE1BA0A087WTH5 132 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 B4GAT1O43505 415 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 RAP2AP10114 183 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ACRP10323 421 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 HOXD12P35452 270 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 HALP42357 657 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 VEGFBP49765 207 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 WDR5P61964 334 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 GCNT7Q6ZNI0 430 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 OR10Q1Q8NGQ4 319 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 EGLN2Q96KS0 407 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TSSK3Q96PN8 268 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PPT2Q9UMR5 302 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PPIL1Q9Y3C6 166 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 IGLV3-16A0A075B6K0 115 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TRBV5-3A0A0A0MS03 114 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 NEDD8-MDP1E9PL57 170 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 TMX2-CTNND1H3BSU7 103 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 FGF18O76093 207 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PRSS23O95084 383 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 LRATO95237 230 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 C7P10643 843 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 CSF2RAP15509 400 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ITPKAP23677 461 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 SHMT2P34897 504 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 CDKN2CP42773 168 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 SPINT3P49223 89 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ARSFP54793 590 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PTCHD3Q3KNS1 767 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 ZBTB8BQ8NAP8 495 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 SELENOMQ8WWX9 145 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 CCDC115Q96NT0 180 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 MUS81Q96NY9 551 aa16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 PAIP1Q9H074 479 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 RSPH9Q9H1X1 276 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-213ENST00000618865 A0A087WXM4 84 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 GSTA4O15217 222 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 IL6P05231 212 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 ELK4P28324 431 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 MAD2L1Q13257 205 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 FAM98BQ52LJ0 330 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 CARD16Q5EG05 197 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 ABRAXAS1Q6UWZ7 409 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 STK32CQ86UX6 486 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 LSM14AQ8ND56 463 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 SORCS1Q8WY21 1168 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 GFM2Q969S9 779 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 APIPQ96GX9 242 aa16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 NPLQ9BXD5 320 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-213ENST00000618865 ATG10Q9H0Y0 220 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms