RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MAP7Q14244 749 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 GRB7Q14451 532 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 GBX1Q14549 363 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 KYNUQ16719 465 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 PWWP2BQ6NUJ5 590 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ZNF549Q6P9A3 640 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 TTC23LQ6PF05 361 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 C6orf15Q6UXA7 325 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 C19orf47Q8N9M1 422 aaKnown RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 LMNTD1Q8N9Z9 388 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ZSCAN1Q8NBB4 408 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 GIMAP7Q8NHV1 300 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 KCNJ9Q92806 393 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 CERS2Q96G23 380 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 TRAPPC9Q96Q05 1148 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 OR2A14Q96R47 310 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 RAB11FIP5Q9BXF6 653 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 DPH5Q9H2P9 285 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 GPN2Q9H9Y4 310 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ZC3H7BQ9UGR2 993 aaKnown RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 SNX24Q9Y343 169 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 TLN1Q9Y490 2541 aaKnown RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 A0A0J9YY10 115 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 LOC101059948A0A1B0GTJ6 334 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 TMEM150CB9EJG8 249 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 RASGRF2O14827 1237 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 MAP3K7O43318 606 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 RAD51CO43502 376 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 STAT5AP42229 794 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 CLCN7P51798 805 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 ABHD18Q0P651 414 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 CUL1Q13616 776 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 UBAP2LQ14157 1087 aaKnown RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 KIR2DS3Q14952 304 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 TTLL9Q3SXZ7 439 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 ACSBG2Q5FVE4 666 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 HIST2H2BCQ6DN03 193 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 TMEM126BQ8IUX1 230 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 ANKMY2Q8IV38 441 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 C2orf73Q8N5S3 287 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 LINC01555Q8NAE3 123 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 FLVCR1-AS1Q8TAF5 88 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 GABPB2Q8TAK5 448 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 ZNF501Q96CX3 271 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 SLC30A3Q99726 388 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 MENTQ9BUN1 341 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 SLC17A6Q9P2U8 582 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 SLC39A10Q9ULF5 831 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 MRFAP1Q9Y605 127 aa15.44■□□□□ 0.06
BRCA1-228ENST00000618469 SNRNP200O75643 2136 aaKnown RBP15.44■□□□□ 0.06
BRCA1-228ENST00000618469 FLNCQ14315 2725 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 FAM187AA6NFU0 413 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 NDC80O14777 642 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 TP73O15350 636 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 CPNE3O75131 537 aaKnown RBP15.43■□□□□ 0.06
BRCA1-228ENST00000618469 SCRG1O75711 98 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 HAUS5O94927 633 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 C1orf105O95561 183 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 CD9P21926 228 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 CCNFP41002 786 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 PDIA2Q13087 525 aaKnown RBP15.43■□□□□ 0.06
BRCA1-228ENST00000618469 KLHL38Q2WGJ6 581 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 DEFB110Q30KQ9 67 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 CCSMST1Q4G0I0 132 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 BPHLQ86WA6 291 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-228ENST00000618469 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 RAB42Q8N4Z0 105 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 BBOF1Q8ND07 529 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 OR2L8Q8NGY9 312 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 OR8K5Q8NH50 307 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 RAD51AP1Q96B01 352 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 LRRC39Q96DD0 335 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 FCRL4Q96PJ5 515 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 NDNQ99608 321 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 GPR21Q99679 349 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 AARSD1Q9BTE6 412 aaKnown RBP15.43■□□□□ 0.06
BRCA1-228ENST00000618469 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 MED16Q9Y2X0 877 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 COMMD10Q9Y6G5 202 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 TEX264Q9Y6I9 313 aa15.43■□□□□ 0.06
BRCA1-228ENST00000618469 ARHGEF33A8MVX0 844 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 VPS26AO75436 327 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 NTRK1P04629 796 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 ITGB2P05107 769 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 DLSTP36957 453 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 CARSP49589 748 aaKnown RBP15.42■□□□□ 0.06
BRCA1-228ENST00000618469 CALCOCO2Q13137 446 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 FASTKD3Q14CZ7 662 aaKnown RBP15.42■□□□□ 0.06
BRCA1-228ENST00000618469 SLC5A12Q1EHB4 618 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.42■□□□□ 0.06
BRCA1-228ENST00000618469 STEAP4Q687X5 459 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 TRMT10BQ6PF06 316 aaKnown RBP15.42■□□□□ 0.06
BRCA1-228ENST00000618469 CDHR3Q6ZTQ4 885 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 MAATS1Q7Z4T9 603 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 FAM20CQ8IXL6 584 aa15.42■□□□□ 0.06
BRCA1-228ENST00000618469 OR1L3Q8NH93 324 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms