RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 RPA4Q13156 261 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 LPAL2Q16609 132 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 ZNF678Q5SXM1 525 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 SFTPA2Q8IWL1 248 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 PHACTR4Q8IZ21 702 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 AGR3Q8TD06 166 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 FOPNLQ96NB1 174 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 IMP3Q9NV31 184 aaKnown RBP15.84■□□□□ 0.13
SNAP47-213ENST00000617596 NUDT4Q9NZJ9 180 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 STX18Q9P2W9 335 aaKnown RBP15.84■□□□□ 0.13
SNAP47-213ENST00000617596 PLAGL1Q9UM63 463 aa15.84■□□□□ 0.13
SNAP47-213ENST00000617596 EDF1O60869 148 aaKnown RBP15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HIST1H2AGP0C0S8 130 aaPredicted RBP15.83■□□□□ 0.12
SNAP47-213ENST00000617596 JUNDP17535 347 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HIST1H2ADP20671 130 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 IMPDH1P20839 514 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 CYP2A7P20853 494 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 IDSP22304 550 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 MAP4P27816 1152 aaKnown RBP15.83■□□□□ 0.12
SNAP47-213ENST00000617596 SLC1A6P48664 564 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HSPA7P48741 367 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HERVK_113P63132 956 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 NFKB2Q00653 900 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 PLOD1Q02809 727 aaPredicted RBP15.83■□□□□ 0.12
SNAP47-213ENST00000617596 UNC50Q53HI1 259 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 PRRT3Q5FWE3 981 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 CEP68Q76N32 757 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 RASGRP3Q8IV61 690 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 SLC22A9Q8IVM8 553 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 MCOLN3Q8TDD5 553 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 RHBDF1Q96CC6 855 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HIST1H2AHQ96KK5 128 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 C12orf66Q96MD2 445 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 GBP5Q96PP8 586 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 PKP4Q99569 1192 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 HIST1H2AJQ99878 128 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 H2AFJQ9BTM1 129 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 ERVK-6Q9BXR3 956 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 ACSL5Q9ULC5 683 aa15.83■□□□□ 0.12
SNAP47-213ENST00000617596 TDRKHQ9Y2W6 561 aaKnown RBP15.83■□□□□ 0.12
SNAP47-213ENST00000617596 A0A1B0GVT2 93 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 IFRD1O00458 451 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CCDC22O60826 627 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 AFF3P51826 1226 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 ALDH18A1P54886 795 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 NXPH1P58417 271 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 DNAJB13P59910 316 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SP140Q13342 867 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 ARL13AQ5H913 290 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CFAP157Q5JU67 520 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 RNF220Q5VTB9 566 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 ATG16L1Q676U5 607 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 PDPRQ8NCN5 879 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 C10orf82Q8WW14 230 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 PYCR2Q96C36 320 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CCDC126Q96EE4 140 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 TMEM79Q9BSE2 394 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 ATG10Q9H0Y0 220 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 RDH14Q9HBH5 336 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 FSCN3Q9NQT6 498 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 TRNAU1APQ9NX07 287 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 MARCOQ9UEW3 520 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 APOBEC3BQ9UH17 382 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 HAO1Q9UJM8 370 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 KLF11O14901 512 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SLC16A5O15375 505 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SDC3O75056 442 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SNNO75324 88 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CATP04040 527 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 S100BP04271 92 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 KITP10721 976 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CTSEP14091 401 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 ABCE1P61221 599 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 LRP8Q14114 963 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 RCN2Q14257 317 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 CCDC6Q16204 474 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 FAM91A1Q658Y4 838 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 IQCHQ86VS3 1027 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 TRIM42Q8IWZ5 723 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 LSMEM2Q8N112 164 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 FAM174AQ8TBP5 190 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SREK1Q8WXA9 508 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 PIGKQ92643 395 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 NELL1Q92832 810 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 PPP1R14BQ96C90 147 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SORT1Q99523 831 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 LRRC61Q9BV99 259 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 TRIM54Q9BYV2 358 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 GSTO2Q9H4Y5 243 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 SEMA4BQ9NPR2 832 aaPredicted RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 WWOXQ9NZC7 414 aa15.82■□□□□ 0.12
SNAP47-213ENST00000617596 PTBP2Q9UKA9 531 aaKnown RBP15.82■□□□□ 0.12
SNAP47-213ENST00000617596 A0A1B0GTL3 188 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 TNFRSF10AO00220 468 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 SLC16A8O95907 504 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 ANXA5P08758 320 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 ENO2P09104 434 aaPredicted RBP15.81■□□□□ 0.12
SNAP47-213ENST00000617596 PIM1P11309 404 aaPredicted RBP15.81■□□□□ 0.12
SNAP47-213ENST00000617596 GRK2P25098 689 aa15.81■□□□□ 0.12
SNAP47-213ENST00000617596 POLE2P56282 527 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms