RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ADGRG6Q86SQ4 1221 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 SYVN1Q86TM6 617 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 CARFQ8N187 725 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 TRIML2Q8N7C3 387 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 Q8NA96 180 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 SIDT2Q8NBJ9 832 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 MR1Q95460 341 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ZDHHC12Q96GR4 267 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 QKIQ96PU8 341 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPC6-202ENST00000617456 GPR87Q9BY21 358 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 FAM192AQ9GZU8 254 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 NSRP1Q9H0G5 558 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 POT1Q9NUX5 634 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 SMOXQ9NWM0 555 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 IL17CQ9P0M4 197 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ZNF624Q9P2J8 865 aaPredicted RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 SLC23A2Q9UGH3 650 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 FARSAQ9Y285 508 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 PKP3Q9Y446 797 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 PCDHA3Q9Y5H8 950 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 EPN1Q9Y6I3 576 aaPredicted RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 IGHV5-51A0A0C4DH38 117 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 TLDC2A0PJX2 215 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 DYTNA2CJ06 578 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 C5orf60A6NFR6 353 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 AGAP14A8MT82 685 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 HAT1O14929 419 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 PJA2O43164 708 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 TJP3O95049 919 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 MT-CYBP00156 380 aaPredicted RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 SLC4A1P02730 911 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 NELFEP18615 380 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 RPL10P27635 214 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 CD68P34810 354 aaPredicted RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 SKIV2L2P42285 1042 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 CAPZBP47756 277 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ARL4DP49703 201 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 DRG2P55039 364 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 GEMP55040 296 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 WNT3AP56704 352 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 TMEM115Q12893 351 aaPredicted RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 SP140Q13342 867 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 RAPSNQ13702 412 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 GTF2H3Q13889 308 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 GPR18Q14330 331 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 GALNT3Q14435 633 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ADRM1Q16186 407 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 LONRF2Q1L5Z9 754 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 FAM69BQ5VUD6 431 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 IL23RQ5VWK5 629 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 C1QL3Q5VWW1 255 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SLC6A19Q695T7 634 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 KLHL35Q6PF15 583 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 RANBP10Q6VN20 620 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 CERS6Q6ZMG9 384 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 PID1Q7Z2X4 250 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 TICAM1Q8IUC6 712 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 KLHDC8BQ8IXV7 354 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 RBMXL3Q8N7X1 1067 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 DDHD1Q8NEL9 900 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 FDCSPQ8NFU4 85 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 HEXDCQ8WVB3 486 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 KLHL6Q8WZ60 621 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SEC14L1Q92503 715 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 CXorf40BQ96DE9 158 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 MRGPRX2Q96LB1 330 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 C5orf34Q96MH7 638 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 TTC25Q96NG3 672 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 FCRL4Q96PJ5 515 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 NDNQ99608 321 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 NUDT9Q9BW91 350 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 C12orf10Q9HB07 376 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ARNT2Q9HBZ2 717 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SLC40A1Q9NP59 571 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 MLXIPLQ9NP71 852 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 IL26Q9NPH9 171 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ATAD3AQ9NVI7 634 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 MOCS1Q9NZB8 636 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SEMA5BQ9P283 1151 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 KLHL8Q9P2G9 620 aaPredicted RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 SHOC2Q9UQ13 582 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 SLC5A6Q9Y289 635 aa8.32□□□□□ -1.08
GPC6-202ENST00000617456 ZNF106Q9H2Y7 1883 aaKnown RBP8.32□□□□□ -1.08
GPC6-202ENST00000617456 LOC105371267A0A1B0GV96 52 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 MIF4GDA9UHW6 222 aaKnown RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 F5H423 210 aaPredicted RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 IFRD1O00458 451 aaPredicted RBP8.31□□□□□ -1.08
GPC6-202ENST00000617456 MTX2O75431 263 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PMPCBO75439 489 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 GSTA2P09210 222 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 GSTM1P09488 218 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 EBLN1P0CF75 366 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 BRAFP15056 766 aa8.31□□□□□ -1.08
GPC6-202ENST00000617456 PORP16435 677 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms