RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 CLCNKAP51800 687 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 TARDBPQ13148 414 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■■ 42.4
ATXN2-227ENST00000616825 PRAMEF14Q5SWL7 426 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 PRAMEF13Q5VWM6 474 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 TMEM198Q66K66 360 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 GPR153Q6NV75 609 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 LRRTM4Q86VH4 590 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 CMTM8Q8IZV2 173 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 OR10H4Q8NGA5 316 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 CYP2S1Q96SQ9 504 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 EBF4Q9BQW3 602 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 TRMT61BQ9BVS5 477 aaKnown RBP17.36■□□□□ 0.37
ATXN2-227ENST00000616825 GALPQ9UBC7 116 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 AJAP1Q9UKB5 411 aaPredicted RBP17.36■□□□□ 0.37
ATXN2-227ENST00000616825 SNX7Q9UNH6 387 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 DGKBQ9Y6T7 804 aa17.36■□□□□ 0.37
ATXN2-227ENST00000616825 ALPIP09923 528 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 HOXC12P31275 282 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 PIK3CBP42338 1070 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 AP3S2P59780 193 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 AMZ1Q400G9 498 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 TXNRD3NBQ6F5E7 133 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 Q6ZVU0 165 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 FAM46DQ8NEK8 389 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 TNFAIP8L1Q8WVP5 186 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 JSRP1Q96MG2 331 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 TMEM175Q9BSA9 504 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 CLCA3PQ9Y6N3 262 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 MTX2O75431 263 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 ACADLP28330 430 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 RBBP4Q09028 425 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 ZNF461Q8TAF7 563 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 HTRA1Q92743 480 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 BHLHE41Q9C0J9 482 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 SMOC2Q9H3U7 446 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 KAT8Q9H7Z6 458 aaKnown RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 MED31Q9Y3C7 131 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 FZD9O00144 591 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 PPEF2O14830 753 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 POP7O75817 140 aaKnown RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 ALPPP05187 535 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 EEFSECP57772 596 aaKnown RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 SLC9B1Q4ZJI4 515 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 RNASE12Q5GAN4 147 aaKnown RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 LCN1P1Q5VSP4 162 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 NAPRTQ6XQN6 538 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 TPRG1Q6ZUI0 275 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 RAB43Q86YS6 212 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 SLC30A8Q8IWU4 369 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 PIGKQ92643 395 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 COMMD4Q9H0A8 199 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 MKKSQ9NPJ1 570 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 A0A0X1KG70 313 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 NOS1APO75052 506 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 HMGN1P05114 100 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 FSHRP23945 695 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 ACVRL1P37023 503 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 CTSOP43234 321 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 CLCN4P51793 760 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 CCNHP51946 323 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 NCBP2P52298 156 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■■■■□ 22.6
ATXN2-227ENST00000616825 NRLP54845 237 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 KLF1Q13351 362 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 KLHL22Q53GT1 634 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 SIRPB2Q5JXA9 342 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 PDE12Q6L8Q7 609 aaKnown RBP17.35■□□□□ 0.37
ATXN2-227ENST00000616825 HFE2Q6ZVN8 426 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 GSDMCQ9BYG8 508 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 ZDHHC18Q9NUE0 388 aa17.35■□□□□ 0.37
ATXN2-227ENST00000616825 CLIC1O00299 241 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 BTN3A3O00478 584 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 NR4A1P22736 598 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 TSPAN5P62079 268 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 CRB2Q5IJ48 1285 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 PIGWQ7Z7B1 504 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 OR5T3Q8NGG3 340 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 OR5K1Q8NHB7 308 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 RGMAQ96B86 450 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 C11orf16Q9NQ32 467 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 CLDND1Q9NY35 253 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 SCML2Q9UQR0 700 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 PEX16Q9Y5Y5 336 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 A8MT66 165 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 J3KR12 359 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 SAP18O00422 153 aaKnown RBP17.34■□□□□ 0.37
ATXN2-227ENST00000616825 ECI2O75521 394 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 S100A9P06702 114 aaKnown RBP17.34■□□□□ 0.37
ATXN2-227ENST00000616825 ADH5P11766 374 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 AZGP1P25311 298 aaKnown RBP17.34■□□□□ 0.37
ATXN2-227ENST00000616825 TIE1P35590 1138 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 ALDH3A2P51648 485 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 TNFAIP8L3Q5GJ75 292 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 PDPRQ8NCN5 879 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 TBL1XR1Q9BZK7 514 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 TBC1D17Q9HA65 648 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 HS3ST4Q9Y661 456 aa17.34■□□□□ 0.37
ATXN2-227ENST00000616825 ERI3O43414 337 aaKnown RBP17.34■□□□□ 0.37
ATXN2-227ENST00000616825 MYCLP1P12525 358 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms