RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 FAM234BA2RU67 622 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 METTL15A6NJ78 407 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 IQCF5A8MTL0 148 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MAFO75444 373 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ERVK-8P63133 956 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CEP68Q76N32 757 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MIB1Q86YT6 1006 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TMEM209Q96SK2 561 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 DPH2Q9BQC3 489 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TRIP11Q15643 1979 aa13.71□□□□□ -0.22
TNFRSF11A-205ENST00000616710 A0A1W2PRG6 482 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 KPNA5O15131 536 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SOX3P41225 446 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNF81P51508 661 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 UBQLNLQ8IYU4 475 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 LIX1Q8N485 282 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 LSMEM1Q8N8F7 131 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CNDP2Q96KP4 475 aaKnown RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNF300Q96RE9 604 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CCM2Q9BSQ5 444 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 KIFC1Q9BW19 673 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CHIAQ9BZP6 476 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CLPBQ9H078 707 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MIOSQ9NXC5 875 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 A0A1B0GVC2 190 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 A6NIN4 97 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CD3EAPO15446 510 aaKnown RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ECI2O75521 394 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 HLA-DQB2P05538 268 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 INSRRP14616 1297 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 DNAJB13P59910 316 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 GABARAPL2P60520 117 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TIMM50Q3ZCQ8 353 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TOR2AQ5JU69 321 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MARC1Q5VT66 337 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 OR2T5Q6IEZ7 315 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 OR2T29Q8NH02 315 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 BRSK1Q8TDC3 778 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 BPIFB1Q8TDL5 484 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CENPIQ92674 756 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CFL2Q9Y281 166 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MAST2Q6P0Q8 1798 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 LOC105371267A0A1B0GV96 52 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 RFXANKO14593 260 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PDPK1O15530 556 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ITGALP20701 1170 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 XPAP23025 273 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 OR1E2P47887 323 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 HSPA7P48741 367 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CDONQ4KMG0 1287 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SAMD7Q7Z3H4 446 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TRIM69Q86WT6 500 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 KRT73Q86Y46 540 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZDHHC17Q8IUH5 632 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 LRRC17Q8N6Y2 441 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 LINGO1Q96FE5 620 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 C11orf16Q9NQ32 467 aa13.7□□□□□ -0.22
TNFRSF11A-205ENST00000616710 A0A0U1RQS6 177 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CRISP3P54108 245 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CDH12P55289 794 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CAV3P56539 151 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TATDN3Q17R31 274 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 RFTN2Q52LD8 501 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 OSTM1Q86WC4 334 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 DENND1CQ8IV53 801 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SIMC1Q8NDZ2 872 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNF431Q8TF32 576 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PANX1Q96RD7 426 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 CDADC1Q9BWV3 514 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 MUC13Q9H3R2 512 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SYTL2Q9HCH5 934 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ABCD2Q9UBJ2 740 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 EIF3KQ9UBQ5 218 aaKnown RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNFX1Q9P2E3 1918 aaKnown RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 SCO2O43819 266 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PDGFAP04085 211 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNF286BP0CG31 522 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 ZNF250P15622 560 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 PSMA1P25786 263 aaKnown RBP13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 NNMTP40261 264 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 HOXC5Q00444 222 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 EMX2Q04743 252 aa13.69□□□□□ -0.22
TNFRSF11A-205ENST00000616710 KIAA1614Q5VZ46 1190 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms