RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 UGT2B7P16662 529 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 ACADLP28330 430 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 NPY2RP49146 381 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 BASP1P80723 227 aaKnown RBP18.28■□□□□ 0.52
CDX1-202ENST00000616154 CKAP4Q07065 602 aaKnown RBP18.28■□□□□ 0.52
CDX1-202ENST00000616154 TTC27Q6P3X3 843 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 UNC5AQ6ZN44 842 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 GSTA5Q7RTV2 222 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 TRIM73Q86UV7 250 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 RBMXL3Q8N7X1 1067 aaKnown RBP18.28■□□□□ 0.52
CDX1-202ENST00000616154 PPHLN1Q8NEY8 458 aaKnown RBP18.28■□□□□ 0.52
CDX1-202ENST00000616154 OR4L1Q8NH43 312 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 PNPLA2Q96AD5 504 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 IP6K3Q96PC2 410 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 OR2A14Q96R47 310 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 MRM3Q9HC36 420 aaKnown RBP18.28■□□□□ 0.52
CDX1-202ENST00000616154 POLG2Q9UHN1 485 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 ASF1AQ9Y294 204 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 NEU2Q9Y3R4 380 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 PCM1Q15154 2024 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 NUP210LQ5VU65 1888 aa18.28■□□□□ 0.52
CDX1-202ENST00000616154 A6NL46 340 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 CCDC188H7C350 402 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 OR2B3O76000 313 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 FTH1P02794 183 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 GABRA4P48169 554 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 PLOD1Q02809 727 aaPredicted RBP18.27■□□□□ 0.52
CDX1-202ENST00000616154 KCNJ11Q14654 390 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 ZIC1Q15915 447 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 PRR30Q53SZ7 412 aaPredicted RBP18.27■□□□□ 0.52
CDX1-202ENST00000616154 SLC6A19Q695T7 634 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 RHBDD2Q6NTF9 364 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 LRRC8BQ6P9F7 803 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 MRGPREQ86SM8 312 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 TBC1D21Q8IYX1 336 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 MPP5Q8N3R9 675 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 SPATA4Q8NEY3 305 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 FLVCR1-AS1Q8TAF5 88 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 ELMO1Q92556 727 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 N4BP2L2Q92802 583 aaPredicted RBP18.27■□□□□ 0.52
CDX1-202ENST00000616154 TTC1Q99614 292 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 KIFC1Q9BW19 673 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 AP1M1Q9BXS5 423 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 SLAMF7Q9NQ25 335 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 CHRAC1Q9NRG0 131 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 OR6C2Q9NZP2 312 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 BFARQ9NZS9 450 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 C5AR2Q9P296 337 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 NOTCH2Q04721 2471 aa18.27■□□□□ 0.52
CDX1-202ENST00000616154 A0A0J9YY10 115 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 SLC5A10A0PJK1 596 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 HCRTR1O43613 425 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 PHF2O75151 1096 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 CHRM5P08912 532 aaPredicted RBP18.26■□□□□ 0.51
CDX1-202ENST00000616154 TPBGLP0DKB5 382 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 CBSLP0DN79 551 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 VARSP26640 1264 aaKnown RBP18.26■□□□□ 0.51
CDX1-202ENST00000616154 OTX2P32243 289 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 CBSP35520 551 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 PRAMEP78395 509 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 SEMA3AQ14563 771 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 DEFB110Q30KQ9 67 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 AARS2Q5JTZ9 985 aaKnown RBP18.26■□□□□ 0.51
CDX1-202ENST00000616154 OR5K2Q8NHB8 316 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 PROKR1Q8TCW9 393 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 GBP5Q96PP8 586 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 MFRPQ9BY79 579 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 SPHK1Q9NYA1 384 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 LUZP4Q9P127 313 aa18.26■□□□□ 0.51
CDX1-202ENST00000616154 GOLGA6L10A0A0M3HER8 536 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 TCRBV7S3A2A0A539 114 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 BHMG1C9JSJ3 638 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 F8W8V4 182 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 OR1I1O60431 355 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 CD63P08962 238 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 OR56A5P0C7T3 313 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 ARNTP27540 789 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 PPARGP37231 505 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 FNTAP49354 379 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 SESN2P58004 480 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 SSPNQ14714 243 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 C4orf17Q53FE4 359 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 FASTKD1Q53R41 847 aaKnown RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 VWA5B1Q5TIE3 1220 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 MLIPQ5VWP3 458 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 OR6P1Q8NGX9 317 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 SSC4DQ8WTU2 575 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 MAGOHBQ96A72 148 aaKnown RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 SLC29A3Q9BZD2 475 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 SPRTNQ9H040 489 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 CUEDC1Q9NWM3 386 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 PLEKHB1Q9UF11 243 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 GPN3Q9UHW5 284 aaPredicted RBP18.25■□□□□ 0.51
CDX1-202ENST00000616154 DOPEY1Q5JWR5 2465 aa18.25■□□□□ 0.51
CDX1-202ENST00000616154 TCP11X1B4DZS4 312 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 ZSCAN9O15535 394 aaPredicted RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 SEMA7AO75326 666 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 IGHEP01854 428 aa18.24■□□□□ 0.51
CDX1-202ENST00000616154 COILP38432 576 aaPredicted RBP18.24■□□□□ 0.51
CDX1-202ENST00000616154 FOLR3P41439 243 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms