RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ARL14EPQ8N8R7 260 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 SORCS1Q8WY21 1168 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 KCNH6Q9H252 994 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 EIF2B3Q9NR50 452 aaKnown RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 ANKRD33BA6NCL7 494 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TPP1O14773 563 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 ATG12O94817 140 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 JUNP05412 331 aaKnown RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 PLET1Q6UQ28 207 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 ABRAQ8N0Z2 381 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 ZBED6CLQ96FA7 236 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 TXN2Q99757 166 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TP53TG5Q9Y2B4 290 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 DUX1O43812 170 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 ADH5P11766 374 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TOB1P50616 345 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 MAPK7Q13164 816 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 POU5F2Q8N7G0 328 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TBX5Q99593 518 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TBCCD1Q9NVR7 557 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 MLXQ9UH92 298 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 TMX2Q9Y320 296 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 MYH7P12883 1935 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 A0A0G2JPF8 293 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 DAPL1A0PJW8 107 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 HNRNPCL3B7ZW38 293 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 HNRNPCL4P0DMR1 293 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 OR12D1P0DN82 309 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 PREPP48147 710 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 OAZ1P54368 228 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 NTRK2Q16620 822 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 BRMS1LQ5PSV4 323 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 CLPTM1LQ96KA5 538 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 GNB4Q9HAV0 340 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 USP53Q70EK8 1073 aa12.4□□□□□ -0.43
TCF4-248ENST00000616053 OR2AG1Q9H205 316 aa12.4□□□□□ -0.43
TCF4-248ENST00000616053 IL36AQ9UHA7 158 aa12.4□□□□□ -0.43
TCF4-248ENST00000616053 ZFR2Q9UPR6 939 aaKnown RBP12.4□□□□□ -0.43
TCF4-248ENST00000616053 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 FXR1P51114 621 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCF4-248ENST00000616053 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 EEF1A1P5Q5VTE0 462 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 TIGD4Q8IY51 512 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 WDSUB1Q8N9V3 476 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CRYM-AS1A6NIL9 109 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 LGR5O75473 907 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 MELKQ14680 651 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 GRK1Q15835 563 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ELMOD2Q8IZ81 293 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CERS2Q96G23 380 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 LIN37Q96GY3 246 aaPredicted RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 DDX20Q9UHI6 824 aaKnown RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 RAI2Q9Y5P3 530 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 UNC5CO95185 931 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ITGA2BP08514 1039 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CIR1Q86X95 450 aaPredicted RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 LRFN5Q96NI6 719 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ZFP3Q96NJ6 502 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 DGKBQ9Y6T7 804 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PSMA1P25786 263 aaKnown RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 KIR3DL1P43629 444 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 RAB31Q13636 194 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 MANEAQ5SRI9 462 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 GALNT10Q86SR1 603 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 RAB43Q86YS6 212 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PPP4R1LQ9P1A2 415 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ABRACLQ9P1F3 81 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 DUXAA6NLW8 204 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PLATP00750 562 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 IFNA5P01569 189 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 SLC15A1P46059 708 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 MED11Q9P086 117 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 U3KQV3 271 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 SH3PXD2BA1X283 911 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 CLDN9O95484 217 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 AKR1C4P17516 323 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 F2RP25116 425 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 DGKQP52824 942 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 GRM2Q14416 872 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms