RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CHIT1Q13231 466 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SCGB2A2Q13296 93 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ITGADQ13349 1161 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GPM6BQ13491 265 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TDGQ13569 410 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TSTA3Q13630 321 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 DPYSQ14117 519 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SQLEQ14534 574 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 IRF3Q14653 427 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PCLAFQ15004 111 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 RCN1Q15293 331 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ZMYND11Q15326 602 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 RPS6KA1Q15418 735 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CCDC6Q16204 474 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TPD52L1Q16890 204 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 LETM2Q2VYF4 491 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CFAP221Q4G0U5 840 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FASTKD1Q53R41 847 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MDH1BQ5I0G3 518 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TCTE1Q5JU00 501 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GKAP1Q5VSY0 366 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 KRT39Q6A163 491 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PM20D1Q6GTS8 502 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TTI2Q6NXR4 508 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CDC73Q6P1J9 531 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PSRC1Q6PGN9 363 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PAPD4Q6PIY7 484 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MOXD1Q6UVY6 613 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SUSD1Q6UWL2 747 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 B3GNT6Q6ZMB0 384 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 C9orf139Q6ZV77 190 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TOM1L2Q6ZVM7 507 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MOB3CQ70IA8 216 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MARK2Q7KZI7 788 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SPATA21Q7Z572 469 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SFR1Q86XK3 245 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 DCUN1D3Q8IWE4 304 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CNTN4Q8IWV2 1026 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ARHGAP12Q8IWW6 846 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MCEMP1Q8IX19 187 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CFAP206Q8IYR0 622 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 BBS5Q8N3I7 341 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FBXW8Q8N3Y1 598 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ARL14Q8N4G2 192 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MINDY1Q8N5J2 469 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SLC4A11Q8NBS3 891 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CAMKVQ8NCB2 501 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TMEM116Q8NCL8 245 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 AGBL3Q8NEM8 1001 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 OR13C2Q8NGS9 318 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 LNX1Q8TBB1 728 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MIPOL1Q8TD10 442 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ST7LQ8TDW4 575 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SORCS1Q8WY21 1168 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 INTS12Q96CB8 462 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SPACA9Q96E40 222 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 C19orf60Q96EN9 201 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 GDAP1L1Q96MZ0 367 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 NODALQ96S42 347 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SIN3AQ96ST3 1273 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 EPYCQ99645 322 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 EGFL8Q99944 293 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MXRA8Q9BRK3 442 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ERP44Q9BS26 406 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 KIFC3Q9BVG8 833 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 NUP85Q9BW27 656 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TPPP3Q9BW30 176 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TEX13AQ9BXU3 409 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PUS3Q9BZE2 481 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 WNT5BQ9H1J7 359 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 EHD1Q9H4M9 534 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 HAUS4Q9H6D7 363 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 AKIRIN1Q9H9L7 192 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 HOMER3Q9NSC5 361 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 BABAM1Q9NWV8 329 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 DONSONQ9NYP3 566 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 UBAP1Q9NZ09 502 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CISD1Q9NZ45 108 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ANKMY1Q9P2S6 941 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 SLC25A10Q9UBX3 287 aaPredicted RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MAD2L2Q9UI95 211 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 FBXW2Q9UKT8 454 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 ITGA11Q9UKX5 1188 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 CDC14AQ9UNH5 594 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 STX8Q9UNK0 236 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 MRPS7Q9Y2R9 242 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 TDRKHQ9Y2W6 561 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PTRH2Q9Y3E5 179 aaKnown RBP2.54□□□□□ -2
HMGB1P24-202ENST00000615653 PCDHAC2Q9Y5I4 1007 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 U3KQV3 271 aa2.54□□□□□ -2
HMGB1P24-202ENST00000615653 WDR19Q8NEZ3 1342 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 TEX13CA0A0J9YWL9 993 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 XKRY2A2RUG3 117 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 FAM172BPA6NC97 362 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 GOLGA6L9A6NEM1 432 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ARHGAP42A6NI28 874 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ACOD1A6NK06 481 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ANXA2P2A6NMY6 339 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 ENO4A6NNW6 628 aa2.53□□□□□ -2
HMGB1P24-202ENST00000615653 A8MZ25 164 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms